STRINGSTRING
sgcd sgcd sgcb sgcb DAG1 DAG1 sgcg sgcg sspn sspn sntb2 sntb2 LOC109515023 LOC109515023 SNTA1 SNTA1 sgce sgce ENSHCOP00000004698 ENSHCOP00000004698 LOC109513277 LOC109513277 sntg1 sntg1 SGCZ SGCZ sntb1 sntb1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sgcdSarcoglycan, delta (dystrophin-associated glycoprotein). (326 aa)
sgcbSarcoglycan, beta (dystrophin-associated glycoprotein). (313 aa)
DAG1Dystroglycan 1. (850 aa)
sgcgSarcoglycan, gamma. (290 aa)
sspnSarcospan (Kras oncogene-associated gene). (220 aa)
sntb2Syntrophin, beta 2. (582 aa)
LOC109515023Peptidase S72 domain-containing protein. (880 aa)
SNTA1Syntrophin alpha 1. (489 aa)
sgceSarcoglycan, epsilon. (413 aa)
ENSHCOP00000004698Syntrophin, gamma 2. (420 aa)
LOC109513277Sarcoglycan, alpha. (394 aa)
sntg1Syntrophin, gamma 1. (529 aa)
SGCZSarcoglycan zeta. (310 aa)
sntb1Syntrophin, basic 1. (531 aa)
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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