77 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cnot1	CCR4-NOT transcription complex, subunit 1. (2367 aa)
	LOC109516184	TACC_C domain-containing protein. (3118 aa)
	LOC109522160	Transforming, acidic coiled-coil containing protein 1. (1215 aa)
	nr1h4	Nuclear receptor subfamily 1, group H, member 4. (476 aa)
	LOC109518905	Uncharacterized protein. (1412 aa)
	LOC109517985	PWWP domain-containing protein. (1766 aa)
	LOC109512841	E1A binding protein p300 a. (2561 aa)
	LOC109513030	Uncharacterized protein. (541 aa)
	nrip1	Nuclear receptor interacting protein 1b. (1260 aa)
	ENSHCOP00000006319	Nuclear receptor coactivator 2. (1028 aa)
	LOC109524267	Peroxisome proliferator-activated receptor gamma, coactivator 1 beta. (748 aa)
	ENSHCOP00000003686	PDZ domain-containing protein. (181 aa)
	grip1	Glutamate receptor interacting protein 1. (885 aa)
	bud31	BUD31 homolog. (144 aa)
	tmf1	TATA element modulatory factor 1. (1154 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	LOC109524269	Bromodomain containing 8. (761 aa)
	Brd8	Uncharacterized protein. (79 aa)
	gtf2b	General transcription factor IIB. (224 aa)
	gtf2h1	General transcription factor IIH, polypeptide 1. (544 aa)
	ddx54	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (856 aa)
	LOC109515231	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (670 aa)
	rnf6	Ring finger protein (C3H2C3 type) 6. (714 aa)
	pagr1	PAXIP1 associated glutamate-rich protein 1. (252 aa)
	nrbf2	Nuclear receptor binding factor 2b. (334 aa)
	ENSHCOP00000025442	AGC-kinase C-terminal domain-containing protein. (68 aa)
	PRKCB	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (674 aa)
	dcaf13	Ddb1 and cul4 associated factor 13. (445 aa)
	LOC109514850	E1A binding protein p300 b. (2669 aa)
	ncoa6	Nuclear receptor coactivator 6. (2298 aa)
	prpf6	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (969 aa)
	snw1	SNW domain containing 1. (536 aa)
	LOC109525372	RBR-type E3 ubiquitin transferase. (489 aa)
	ncor1	Nuclear receptor corepressor 1. (2383 aa)
	DCAF1	DDB1 and CUL4 associated factor 1. (1477 aa)
	mms19	MMS19 homolog, cytosolic iron-sulfur assembly component. (929 aa)
	ppid	Peptidylprolyl isomerase D. (375 aa)
	med25	Mediator complex subunit 25. (749 aa)
	Ncoa2	Uncharacterized protein. (370 aa)
	LOC109515431	Protein kinase C. (666 aa)
	nr0b2	Nuclear receptor subfamily 0, group B, member 2a. (255 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	lef1	Lymphoid enhancer-binding factor 1. (380 aa)
	LOC109517754	Nuclear receptor subfamily 1, group H, member 5. (488 aa)
	bcas3	BCAS3 microtubule associated cell migration factor. (700 aa)
	LOC109521541	Nuclear receptor coactivator 3. (1528 aa)
	ENSHCOP00000018489	Uncharacterized protein. (468 aa)
	SMARCE1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (421 aa)
	ENSHCOP00000017975	AT rich interactive domain 5A (MRF1-like). (514 aa)
	daxx	Daxx domain-containing protein. (492 aa)
	ENSHCOP00000016959	AGC-kinase C-terminal domain-containing protein. (50 aa)
	LOC109511124	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (667 aa)
	hmga1	Uncharacterized protein. (101 aa)
	ENSHCOP00000003011	Zinc finger protein 366. (602 aa)
	nr4a3	Nuclear receptor subfamily 4, group A, member 3. (609 aa)
	NR0B1	Nuclear receptor subfamily 0 group B member 1. (321 aa)
	ENSHCOP00000001976	PWWP domain-containing protein. (147 aa)
	LOC109511949	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (359 aa)
	prkca	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (671 aa)
	NCOA3	Nuclear receptor coactivator 3. (1503 aa)
	nr1h3	Nuclear receptor subfamily 1, group H, member 3. (462 aa)
	LOC109522594	Uncharacterized protein. (577 aa)
	trip4	Thyroid hormone receptor interactor 4. (572 aa)
	LOC109525219	NK3 homeobox 1. (189 aa)
	LOC109528377	Uncharacterized protein. (581 aa)
	taf10	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (188 aa)
	prmt2	Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (378 aa)
	rnf14	RBR-type E3 ubiquitin transferase. (487 aa)
	LOC109514118	TACC_C domain-containing protein. (481 aa)
	ppargc1a	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (915 aa)
	dnaaf4	Dynein axonemal assembly factor 4. (413 aa)
	LOC109511576	Nuclear receptor subfamily 4, group A, member 2b. (596 aa)
	ncor2	Nuclear receptor corepressor 2. (2225 aa)
	ENSHCOP00000010844	Uncharacterized protein. (48 aa)
	ncoa1	Nuclear receptor coactivator 1. (1506 aa)
	kdm1a	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (839 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Brd8	snw1	ENSHCOP00000016260	ENSHCOP00000022906	Uncharacterized protein.	SNW domain containing 1.	0.423
ENSHCOP00000003011	nrip1	ENSHCOP00000003011	ENSHCOP00000006928	Zinc finger protein 366.	Nuclear receptor interacting protein 1b.	0.502
ENSHCOP00000003686	grip1	ENSHCOP00000003686	ENSHCOP00000003681	PDZ domain-containing protein.	Glutamate receptor interacting protein 1.	0.900
ENSHCOP00000006319	LOC109512841	ENSHCOP00000006319	ENSHCOP00000007909	Nuclear receptor coactivator 2.	E1A binding protein p300 a.	0.625
ENSHCOP00000006319	LOC109514850	ENSHCOP00000006319	ENSHCOP00000024673	Nuclear receptor coactivator 2.	E1A binding protein p300 b.	0.625
ENSHCOP00000006319	LOC109517754	ENSHCOP00000006319	ENSHCOP00000018947	Nuclear receptor coactivator 2.	Nuclear receptor subfamily 1, group H, member 5.	0.742
ENSHCOP00000006319	ncoa1	ENSHCOP00000006319	ENSHCOP00000010836	Nuclear receptor coactivator 2.	Nuclear receptor coactivator 1.	0.426
ENSHCOP00000006319	ncoa6	ENSHCOP00000006319	ENSHCOP00000023387	Nuclear receptor coactivator 2.	Nuclear receptor coactivator 6.	0.462
ENSHCOP00000006319	ncor1	ENSHCOP00000006319	ENSHCOP00000022282	Nuclear receptor coactivator 2.	Nuclear receptor corepressor 1.	0.467
ENSHCOP00000006319	ncor2	ENSHCOP00000006319	ENSHCOP00000010931	Nuclear receptor coactivator 2.	Nuclear receptor corepressor 2.	0.467
ENSHCOP00000006319	nr1h3	ENSHCOP00000006319	ENSHCOP00000015233	Nuclear receptor coactivator 2.	Nuclear receptor subfamily 1, group H, member 3.	0.781
ENSHCOP00000006319	nr1h4	ENSHCOP00000006319	ENSHCOP00000008942	Nuclear receptor coactivator 2.	Nuclear receptor subfamily 1, group H, member 4.	0.742
ENSHCOP00000019285	LOC109512841	ENSHCOP00000019285	ENSHCOP00000007909	Deacetylase sirtuin-type domain-containing protein.	E1A binding protein p300 a.	0.442
ENSHCOP00000019285	LOC109514850	ENSHCOP00000019285	ENSHCOP00000024673	Deacetylase sirtuin-type domain-containing protein.	E1A binding protein p300 b.	0.442
ENSHCOP00000019285	kdm1a	ENSHCOP00000019285	ENSHCOP00000010393	Deacetylase sirtuin-type domain-containing protein.	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family.	0.442
ENSHCOP00000019285	ncor1	ENSHCOP00000019285	ENSHCOP00000022282	Deacetylase sirtuin-type domain-containing protein.	Nuclear receptor corepressor 1.	0.607
ENSHCOP00000019285	ncor2	ENSHCOP00000019285	ENSHCOP00000010931	Deacetylase sirtuin-type domain-containing protein.	Nuclear receptor corepressor 2.	0.607
ENSHCOP00000019285	ppargc1a	ENSHCOP00000019285	ENSHCOP00000011947	Deacetylase sirtuin-type domain-containing protein.	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.	0.603
ENSHCOP00000019306	LOC109512841	ENSHCOP00000019306	ENSHCOP00000007909	Sirtuin 1.	E1A binding protein p300 a.	0.442
ENSHCOP00000019306	LOC109514850	ENSHCOP00000019306	ENSHCOP00000024673	Sirtuin 1.	E1A binding protein p300 b.	0.442