(79 nodes) Growth cone network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gap43	Growth associated protein 43. (245 aa)
	auts2	Activator of transcription and developmental regulator AUTS2 a. (1283 aa)
	ABI1	Abl-interactor 1a. (471 aa)
	ENSHCOP00000009608	Uncharacterized protein. (316 aa)
	ENSHCOP00000017769	Peptidylprolyl isomerase. (629 aa)
	LOC109521690	Uncharacterized protein. (250 aa)
	syap1	Synapse associated protein 1. (369 aa)
	LOC109525278	Uncharacterized protein. (1008 aa)
	zfyve27	Zinc finger, FYVE domain containing 27. (417 aa)
	stmn2	Stathmin; Belongs to the stathmin family. (179 aa)
	LOC109517281	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (469 aa)
	LOC109514711	Unc-5 netrin receptor C. (839 aa)
	exoc7	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (690 aa)
	Neo1	Ig-like domain-containing protein. (108 aa)
	NEO1	Neogenin 1. (1180 aa)
	myo9a	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2292 aa)
	ENSHCOP00000014518	Microtubule-associated protein. (342 aa)
	lrrtm1	Leucine rich repeat transmembrane neuronal 1. (525 aa)
	LOC109524034	Nerve growth factor receptor b. (436 aa)
	LOC109517823	Dihydropyrimidinase like 3. (539 aa)
	ENSHCOP00000013347	Uncharacterized protein. (1158 aa)
	ENSHCOP00000013336	Protein kinase domain-containing protein. (472 aa)
	cdk5r1	Cyclin-dependent kinase 5, regulatory subunit 1b (p35). (299 aa)
	LOC109518010	Stathmin; Belongs to the stathmin family. (176 aa)
	LOC109520216	L1 cell adhesion molecule, paralog a. (1202 aa)
	psen2	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (337 aa)
	flrt3	Fibronectin leucine rich transmembrane 3. (650 aa)
	LOC109526814	Uncharacterized protein. (279 aa)
	fxr2	Fragile X mental retardation, autosomal homolog 2. (675 aa)
	LOC109525045	Fragile X mental retardation, autosomal homolog 1. (563 aa)
	fez1	Fasciculation and elongation protein zeta 1 (zygin I). (406 aa)
	LOC109530476	Teashirt zinc finger homeobox 3a. (1114 aa)
	rufy3	RUN and FYVE domain containing 3. (795 aa)
	LOC109525655	Uncharacterized protein. (241 aa)
	elavl2	ELAV-like protein; Belongs to the RRM elav family. (375 aa)
	LOC109528323	Uncharacterized protein. (1237 aa)
	cdk5	Cyclin-dependent kinase 5. (258 aa)
	fmr1	Fragile X mental retardation 1. (558 aa)
	LAMP5	Lysosomal associated membrane protein family member 5. (263 aa)
	ENSHCOP00000002404	Si:dkey-280e21.3. (292 aa)
	whrn	Whirlin a. (977 aa)
	ENSHCOP00000002005	Fibrosin-like 1. (771 aa)
	LOC109507452	ATCAY kinesin light chain interacting caytaxin b. (314 aa)
	LOC109520468	SH3 domain-containing protein. (105 aa)
	LOC109521915	Cordon-bleu WH2 repeat protein. (1443 aa)
	cib1	Calcium and integrin binding 1 (calmyrin). (189 aa)
	LOC109528066	Dystrobrevin binding protein 1b. (192 aa)
	rtn4r	Reticulon 4 receptor. (467 aa)
	cdk5r2	Cyclin-dependent kinase 5, regulatory subunit 2b (p39). (281 aa)
	unc5c	Uncharacterized protein. (916 aa)
	nin	Ninein (GSK3B interacting protein). (1329 aa)
	dcc	DCC netrin 1 receptor. (1445 aa)
	LOC109524533	Teashirt zinc finger homeobox 3b. (1141 aa)
	tsc1	TSC complex subunit 1b. (1217 aa)
	copa	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1222 aa)
	abitram	Actin binding transcription modulator. (187 aa)
	LOC109513649	Cyclin-dependent kinase 5 activator. (331 aa)
	cdkl5	Protein kinase domain-containing protein. (987 aa)
	LOC109524537	Fragile X mental retardation, autosomal homolog 1. (466 aa)
	LOC109524889	Fragile X mental retardation, autosomal homolog 1. (281 aa)
	LOC109508514	FERM domain-containing protein. (294 aa)
	LOC109524482	Glycoprotein M6Aa. (267 aa)
	LOC109518185	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2216 aa)
	c9orf72	Zgc:100846. (443 aa)
	exoc4	Exocyst complex component 4. (998 aa)
	Stmn4	Stathmin; Belongs to the stathmin family. (152 aa)
	cpeb4	Cytoplasmic polyadenylation element binding protein 4a. (737 aa)
	elavl4	ELAV-like protein; Belongs to the RRM elav family. (361 aa)
	LOC109520596	Abl-interactor 1b. (390 aa)
	Zpr1	ZPR1 zinc finger. (447 aa)
	exoc8	Exocyst complex component 8. (688 aa)
	ENSHCOP00000007676	Microtubule-associated protein. (292 aa)
	kif21b	Kinesin family member 21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1572 aa)
	ENSHCOP00000007634	Uncharacterized protein. (614 aa)
	LOC109524734	Cyclin-dependent kinase 5 activator. (335 aa)
	atcay	ATCAY kinesin light chain interacting caytaxin a. (341 aa)
	ENSHCOP00000006698	Microtubule-associated protein. (248 aa)
	ENSHCOP00000006686	Microtubule-associated protein 2. (242 aa)
	shtn1	Shootin 1. (431 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000002404	LOC109520216	ENSHCOP00000002404	ENSHCOP00000009519	Si:dkey-280e21.3.	L1 cell adhesion molecule, paralog a.	0.406
ENSHCOP00000002404	LOC109528323	ENSHCOP00000002404	ENSHCOP00000003757	Si:dkey-280e21.3.	Uncharacterized protein.	0.406
ENSHCOP00000002404	rufy3	ENSHCOP00000002404	ENSHCOP00000005974	Si:dkey-280e21.3.	RUN and FYVE domain containing 3.	0.508
ENSHCOP00000006686	ENSHCOP00000006698	ENSHCOP00000006686	ENSHCOP00000006698	Microtubule-associated protein 2.	Microtubule-associated protein.	0.498
ENSHCOP00000006686	cdk5	ENSHCOP00000006686	ENSHCOP00000003695	Microtubule-associated protein 2.	Cyclin-dependent kinase 5.	0.664
ENSHCOP00000006686	gap43	ENSHCOP00000006686	ENSHCOP00000011066	Microtubule-associated protein 2.	Growth associated protein 43.	0.429
ENSHCOP00000006698	ENSHCOP00000006686	ENSHCOP00000006698	ENSHCOP00000006686	Microtubule-associated protein.	Microtubule-associated protein 2.	0.498
ENSHCOP00000006698	cdk5	ENSHCOP00000006698	ENSHCOP00000003695	Microtubule-associated protein.	Cyclin-dependent kinase 5.	0.664
ENSHCOP00000006698	gap43	ENSHCOP00000006698	ENSHCOP00000011066	Microtubule-associated protein.	Growth associated protein 43.	0.429
ENSHCOP00000007634	LOC109528066	ENSHCOP00000007634	ENSHCOP00000027348	Uncharacterized protein.	Dystrobrevin binding protein 1b.	0.618
ENSHCOP00000007634	fez1	ENSHCOP00000007634	ENSHCOP00000006172	Uncharacterized protein.	Fasciculation and elongation protein zeta 1 (zygin I).	0.440
ENSHCOP00000007676	cdk5	ENSHCOP00000007676	ENSHCOP00000003695	Microtubule-associated protein.	Cyclin-dependent kinase 5.	0.664
ENSHCOP00000007676	gap43	ENSHCOP00000007676	ENSHCOP00000011066	Microtubule-associated protein.	Growth associated protein 43.	0.429
ENSHCOP00000013336	ENSHCOP00000013347	ENSHCOP00000013336	ENSHCOP00000013347	Protein kinase domain-containing protein.	Uncharacterized protein.	0.945
ENSHCOP00000013347	ENSHCOP00000013336	ENSHCOP00000013347	ENSHCOP00000013336	Uncharacterized protein.	Protein kinase domain-containing protein.	0.945
ENSHCOP00000014518	cdk5	ENSHCOP00000014518	ENSHCOP00000003695	Microtubule-associated protein.	Cyclin-dependent kinase 5.	0.664
ENSHCOP00000014518	gap43	ENSHCOP00000014518	ENSHCOP00000011066	Microtubule-associated protein.	Growth associated protein 43.	0.429
LOC109513649	cdk5	ENSHCOP00000023841	ENSHCOP00000003695	Cyclin-dependent kinase 5 activator.	Cyclin-dependent kinase 5.	0.927
LOC109514711	NEO1	ENSHCOP00000015134	ENSHCOP00000014708	Unc-5 netrin receptor C.	Neogenin 1.	0.550
LOC109514711	Neo1	ENSHCOP00000015134	ENSHCOP00000014714	Unc-5 netrin receptor C.	Ig-like domain-containing protein.	0.550