43 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nfkbil1	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1. (335 aa)
	acod1	Aconitate decarboxylase 1. (506 aa)
	ENSHCOP00000007014	Interleukin-1 receptor-associated kinase 3. (331 aa)
	cdk5rap3	CDK5 regulatory subunit associated protein 3. (501 aa)
	commd7	COMM domain containing 7. (199 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	LOC109511789	E3 ubiquitin-protein ligase. (837 aa)
	LOC109508122	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (283 aa)
	LOC109519522	ANK_REP_REGION domain-containing protein. (340 aa)
	LOC109521498	Cylindromatosis (turban tumor syndrome), b. (711 aa)
	faf1	Fas (TNFRSF6) associated factor 1. (658 aa)
	LOC109516522	Uncharacterized protein. (727 aa)
	tnfaip3	Tumor necrosis factor, alpha-induced protein 3. (753 aa)
	otulin	Uncharacterized protein. (663 aa)
	ddit3	DNA-damage-inducible transcript 3. (295 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (771 aa)
	LOC109523136	Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (532 aa)
	chp1	Calcineurin-like EF-hand protein 1. (195 aa)
	prmt2	Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (378 aa)
	dap	Death-associated protein. (105 aa)
	nwd2	NACHT and WD repeat domain containing 2. (1723 aa)
	irak1	Interleukin-1 receptor-associated kinase 1. (606 aa)
	rbck1	RanBP-type and C3HC4-type zinc finger containing 1. (504 aa)
	ENSHCOP00000009710	Si:ch73-174h16.4. (288 aa)
	nr1h4	Nuclear receptor subfamily 1, group H, member 4. (476 aa)
	LOC109521640	E3 ubiquitin-protein ligase. (861 aa)
	ENSHCOP00000027094	Cytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (520 aa)
	ENSHCOP00000027055	Cytochrome P450, family 1, subfamily C, polypeptide 2; Belongs to the cytochrome P450 family. (519 aa)
	LOC109509783	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (308 aa)
	traip	TRAF-interacting protein. (449 aa)
	Trim37	RING-type domain-containing protein. (99 aa)
	commd1	Copper metabolism (Murr1) domain containing 1. (191 aa)
	map2k5	Mitogen-activated protein kinase kinase 5. (409 aa)
	Ufl1	UFM1-specific ligase 1. (727 aa)
	LOC109525597	Formyl peptide receptor 1; Belongs to the G-protein coupled receptor 1 family. (379 aa)
	setd6	N-lysine methyltransferase SETD6; Protein-lysine N-methyltransferase. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily. (448 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	zc3h12a	Si:dkey-206d17.12. (517 aa)
	LOC109517754	Nuclear receptor subfamily 1, group H, member 5. (488 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	usp7	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1111 aa)
	commd6	COMM domain containing 6. (199 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000007014	irak1	ENSHCOP00000007014	ENSHCOP00000012839	Interleukin-1 receptor-associated kinase 3.	Interleukin-1 receptor-associated kinase 1.	0.883
LOC109508122	commd1	ENSHCOP00000016027	ENSHCOP00000022209	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Copper metabolism (Murr1) domain containing 1.	0.527
LOC109508122	irak1	ENSHCOP00000016027	ENSHCOP00000012839	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Interleukin-1 receptor-associated kinase 1.	0.510
LOC109508122	tnfaip3	ENSHCOP00000016027	ENSHCOP00000001357	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Tumor necrosis factor, alpha-induced protein 3.	0.539
LOC109509783	LOC109519522	ENSHCOP00000026447	ENSHCOP00000006784	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	ANK_REP_REGION domain-containing protein.	0.905
LOC109509783	commd1	ENSHCOP00000026447	ENSHCOP00000022209	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Copper metabolism (Murr1) domain containing 1.	0.527
LOC109509783	irak1	ENSHCOP00000026447	ENSHCOP00000012839	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Interleukin-1 receptor-associated kinase 1.	0.510
LOC109509783	psmd10	ENSHCOP00000026447	ENSHCOP00000018924	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Proteasome 26S subunit, non-ATPase 10.	0.552
LOC109509783	tnfaip3	ENSHCOP00000026447	ENSHCOP00000001357	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Tumor necrosis factor, alpha-induced protein 3.	0.539
LOC109511789	LOC109521498	ENSHCOP00000003557	ENSHCOP00000002314	E3 ubiquitin-protein ligase.	Cylindromatosis (turban tumor syndrome), b.	0.416
LOC109511789	LOC109521640	ENSHCOP00000003557	ENSHCOP00000027473	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.901
LOC109511789	cyld	ENSHCOP00000003557	ENSHCOP00000000209	E3 ubiquitin-protein ligase.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.416
LOC109516522	LOC109521498	ENSHCOP00000001527	ENSHCOP00000002314	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), b.	0.908
LOC109516522	rbck1	ENSHCOP00000001527	ENSHCOP00000011175	Uncharacterized protein.	RanBP-type and C3HC4-type zinc finger containing 1.	0.510
LOC109516522	usp7	ENSHCOP00000001527	ENSHCOP00000018154	Uncharacterized protein.	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.	0.405
LOC109519522	LOC109509783	ENSHCOP00000006784	ENSHCOP00000026447	ANK_REP_REGION domain-containing protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.905
LOC109519522	commd1	ENSHCOP00000006784	ENSHCOP00000022209	ANK_REP_REGION domain-containing protein.	Copper metabolism (Murr1) domain containing 1.	0.527
LOC109519522	irak1	ENSHCOP00000006784	ENSHCOP00000012839	ANK_REP_REGION domain-containing protein.	Interleukin-1 receptor-associated kinase 1.	0.510
LOC109519522	tnfaip3	ENSHCOP00000006784	ENSHCOP00000001357	ANK_REP_REGION domain-containing protein.	Tumor necrosis factor, alpha-induced protein 3.	0.539
LOC109521498	LOC109511789	ENSHCOP00000002314	ENSHCOP00000003557	Cylindromatosis (turban tumor syndrome), b.	E3 ubiquitin-protein ligase.	0.416