30 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lpcat3	Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. (480 aa)
	apoa4	Uncharacterized protein. (267 aa)
	ENSHCOP00000006987	Uncharacterized protein. (78 aa)
	gps2	G protein pathway suppressor 2. (339 aa)
	LOC109519522	ANK_REP_REGION domain-containing protein. (340 aa)
	LOC109531656	Uncharacterized protein. (254 aa)
	LOC109531655	Apolipoprotein Eb. (297 aa)
	ENSHCOP00000021764	ABC transporter domain-containing protein. (174 aa)
	LOC109513534	Uncharacterized protein. (259 aa)
	LOC109510814	ABC transporter domain-containing protein. (644 aa)
	pltp	Phospholipid transfer protein. (572 aa)
	LOC109509783	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (308 aa)
	ENPP7	Uncharacterized protein. (434 aa)
	LOC109519187	Low density lipoprotein receptor adaptor protein 1a. (273 aa)
	ENSHCOP00000017784	Uncharacterized protein. (123 aa)
	ENPP7-2	Ectonucleotide pyrophosphatase/phosphodiesterase 7. (266 aa)
	podn	Podocan. (587 aa)
	ldlrap1	Low density lipoprotein receptor adaptor protein 1b. (268 aa)
	LOC109508122	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (283 aa)
	nr1h3	Nuclear receptor subfamily 1, group H, member 3. (462 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	LOC109513614	ABC transporter domain-containing protein. (647 aa)
	LOC109531653	Uncharacterized protein. (270 aa)
	Enpp7	Ectonucleotide pyrophosphatase/phosphodiesterase 7. (432 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	abcg4	ATP-binding cassette, sub-family G (WHITE), member 4a. (630 aa)
	scp2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (540 aa)
	ENSHCOP00000021350	Uncharacterized protein. (251 aa)
	LOC109512249	Zgc:153896. (449 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENPP7	ENSHCOP00000017784	ENSHCOP00000000946	ENSHCOP00000017784	Uncharacterized protein.	Uncharacterized protein.	0.903
ENPP7	Enpp7	ENSHCOP00000000946	ENSHCOP00000005708	Uncharacterized protein.	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	0.901
ENPP7	LOC109512249	ENSHCOP00000000946	ENSHCOP00000008237	Uncharacterized protein.	Zgc:153896.	0.903
ENPP7-2	ENSHCOP00000017784	ENSHCOP00000017787	ENSHCOP00000017784	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	Uncharacterized protein.	0.470
ENSHCOP00000006987	ENSHCOP00000021350	ENSHCOP00000006987	ENSHCOP00000021350	Uncharacterized protein.	Uncharacterized protein.	0.454
ENSHCOP00000006987	LOC109531656	ENSHCOP00000006987	ENSHCOP00000006314	Uncharacterized protein.	Uncharacterized protein.	0.454
ENSHCOP00000006987	apoa4	ENSHCOP00000006987	ENSHCOP00000011146	Uncharacterized protein.	Uncharacterized protein.	0.434
ENSHCOP00000006987	nr1h3	ENSHCOP00000006987	ENSHCOP00000015233	Uncharacterized protein.	Nuclear receptor subfamily 1, group H, member 3.	0.439
ENSHCOP00000017784	ENPP7	ENSHCOP00000017784	ENSHCOP00000000946	Uncharacterized protein.	Uncharacterized protein.	0.903
ENSHCOP00000017784	ENPP7-2	ENSHCOP00000017784	ENSHCOP00000017787	Uncharacterized protein.	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	0.470
ENSHCOP00000017784	Enpp7	ENSHCOP00000017784	ENSHCOP00000005708	Uncharacterized protein.	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	0.903
ENSHCOP00000017784	LOC109512249	ENSHCOP00000017784	ENSHCOP00000008237	Uncharacterized protein.	Zgc:153896.	0.904
ENSHCOP00000021350	ENSHCOP00000006987	ENSHCOP00000021350	ENSHCOP00000006987	Uncharacterized protein.	Uncharacterized protein.	0.454
ENSHCOP00000021350	ENSHCOP00000021764	ENSHCOP00000021350	ENSHCOP00000021764	Uncharacterized protein.	ABC transporter domain-containing protein.	0.454
ENSHCOP00000021350	LOC109510814	ENSHCOP00000021350	ENSHCOP00000023659	Uncharacterized protein.	ABC transporter domain-containing protein.	0.489
ENSHCOP00000021350	LOC109513534	ENSHCOP00000021350	ENSHCOP00000023595	Uncharacterized protein.	Uncharacterized protein.	0.732
ENSHCOP00000021350	LOC109513614	ENSHCOP00000021350	ENSHCOP00000007651	Uncharacterized protein.	ABC transporter domain-containing protein.	0.489
ENSHCOP00000021350	LOC109531653	ENSHCOP00000021350	ENSHCOP00000006307	Uncharacterized protein.	Uncharacterized protein.	0.711
ENSHCOP00000021350	LOC109531655	ENSHCOP00000021350	ENSHCOP00000006310	Uncharacterized protein.	Apolipoprotein Eb.	0.737
ENSHCOP00000021350	abcg4	ENSHCOP00000021350	ENSHCOP00000001164	Uncharacterized protein.	ATP-binding cassette, sub-family G (WHITE), member 4a.	0.489