23 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109529904	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (353 aa)
	ift80	Intraflagellar transport 80 homolog (Chlamydomonas). (778 aa)
	LOC109510414	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (551 aa)
	LOC109528682	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (378 aa)
	VANGL1	Vang-like protein. (548 aa)
	PTK7	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1058 aa)
	adgra3	Adhesion G protein-coupled receptor A3; Belongs to the G-protein coupled receptor 2 family. (1296 aa)
	cthrc1	Collagen triple helix repeat containing 1b. (231 aa)
	LOC109512258	Uncharacterized protein. (652 aa)
	wnt11	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (357 aa)
	ENSHCOP00000023911	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (344 aa)
	dvl2	Dishevelled segment polarity protein 2. (693 aa)
	dvl1	Dishevelled segment polarity protein 1a. (622 aa)
	FZD7	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family. (525 aa)
	fzd4	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (531 aa)
	LOC109520091	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (376 aa)
	ryk	Receptor like tyrosine kinase. (597 aa)
	LOC109525531	Uncharacterized protein. (324 aa)
	VANGL2	Vang-like protein. (527 aa)
	LOC109531620	Uncharacterized protein. (683 aa)
	Fzd2	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family. (548 aa)
	LOC109520209	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (350 aa)
	sfrp2	Secreted frizzled-related protein 2. (299 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000023911	FZD7	ENSHCOP00000023911	ENSHCOP00000015021	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	0.800
ENSHCOP00000023911	Fzd2	ENSHCOP00000023911	ENSHCOP00000006032	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.	0.817
ENSHCOP00000023911	LOC109510414	ENSHCOP00000023911	ENSHCOP00000001656	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.800
ENSHCOP00000023911	LOC109512258	ENSHCOP00000023911	ENSHCOP00000024534	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.499
ENSHCOP00000023911	LOC109520091	ENSHCOP00000023911	ENSHCOP00000011943	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.428
ENSHCOP00000023911	LOC109525531	ENSHCOP00000023911	ENSHCOP00000011682	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.809
ENSHCOP00000023911	LOC109528682	ENSHCOP00000023911	ENSHCOP00000001139	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.428
ENSHCOP00000023911	LOC109531620	ENSHCOP00000023911	ENSHCOP00000010080	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.467
ENSHCOP00000023911	dvl1	ENSHCOP00000023911	ENSHCOP00000021027	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Dishevelled segment polarity protein 1a.	0.467
ENSHCOP00000023911	dvl2	ENSHCOP00000023911	ENSHCOP00000023482	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Dishevelled segment polarity protein 2.	0.467
ENSHCOP00000023911	fzd4	ENSHCOP00000023911	ENSHCOP00000012037	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.849
ENSHCOP00000023911	ryk	ENSHCOP00000023911	ENSHCOP00000011740	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Receptor like tyrosine kinase.	0.663
ENSHCOP00000023911	sfrp2	ENSHCOP00000023911	ENSHCOP00000005098	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Secreted frizzled-related protein 2.	0.809
FZD7	ENSHCOP00000023911	ENSHCOP00000015021	ENSHCOP00000023911	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.800
FZD7	LOC109520091	ENSHCOP00000015021	ENSHCOP00000011943	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.892
FZD7	LOC109520209	ENSHCOP00000015021	ENSHCOP00000005768	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.800
FZD7	LOC109525531	ENSHCOP00000015021	ENSHCOP00000011682	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.685
FZD7	LOC109528682	ENSHCOP00000015021	ENSHCOP00000001139	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.866
FZD7	LOC109529904	ENSHCOP00000015021	ENSHCOP00000003187	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.800
FZD7	LOC109531620	ENSHCOP00000015021	ENSHCOP00000010080	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.841