6 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
psmc1	psmc2	ENSHCOP00000015971	ENSHCOP00000023639	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.999
psmc1	psmc3	ENSHCOP00000015971	ENSHCOP00000011629	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.999
psmc1	psmc4	ENSHCOP00000015971	ENSHCOP00000009820	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.999
psmc1	psmc5	ENSHCOP00000015971	ENSHCOP00000014246	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.999
psmc1	psmc6	ENSHCOP00000015971	ENSHCOP00000010200	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.999
psmc2	psmc1	ENSHCOP00000023639	ENSHCOP00000015971	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.999
psmc2	psmc3	ENSHCOP00000023639	ENSHCOP00000011629	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.999
psmc2	psmc4	ENSHCOP00000023639	ENSHCOP00000009820	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.999
psmc2	psmc5	ENSHCOP00000023639	ENSHCOP00000014246	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.999
psmc2	psmc6	ENSHCOP00000023639	ENSHCOP00000010200	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.999
psmc3	psmc1	ENSHCOP00000011629	ENSHCOP00000015971	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.999
psmc3	psmc2	ENSHCOP00000011629	ENSHCOP00000023639	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.999
psmc3	psmc4	ENSHCOP00000011629	ENSHCOP00000009820	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.999
psmc3	psmc5	ENSHCOP00000011629	ENSHCOP00000014246	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.999
psmc3	psmc6	ENSHCOP00000011629	ENSHCOP00000010200	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.999
psmc4	psmc1	ENSHCOP00000009820	ENSHCOP00000015971	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.999
psmc4	psmc2	ENSHCOP00000009820	ENSHCOP00000023639	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.999
psmc4	psmc3	ENSHCOP00000009820	ENSHCOP00000011629	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.999
psmc4	psmc5	ENSHCOP00000009820	ENSHCOP00000014246	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.999
psmc4	psmc6	ENSHCOP00000009820	ENSHCOP00000010200	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.999