(15 nodes) SH2 domain binding network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109515023	Peptidase S72 domain-containing protein. (880 aa)
	LOC109513808	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (476 aa)
	syngr3	Synaptogyrin. (231 aa)
	ctr9	TPR_REGION domain-containing protein. (1169 aa)
	LOC109526509	Src kinase associated phosphoprotein 1. (330 aa)
	SYNGR2	Synaptogyrin. (223 aa)
	skap2	Src kinase associated phosphoprotein 2. (320 aa)
	LOC109511466	Synaptogyrin. (239 aa)
	sqstm1	Sequestosome 1. (407 aa)
	DAG1	Dystroglycan 1. (850 aa)
	syngr2	Synaptogyrin. (242 aa)
	ENSHCOP00000015627	Phosphoprotein membrane anchor with glycosphingolipid microdomains 1. (386 aa)
	shcbp1	SHC SH2-domain binding protein 1. (690 aa)
	syngr1	Synaptogyrin. (238 aa)
	nlk	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (533 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAG1	LOC109515023	ENSHCOP00000011457	ENSHCOP00000008580	Dystroglycan 1.	Peptidase S72 domain-containing protein.	0.902
LOC109513808	nlk	ENSHCOP00000000891	ENSHCOP00000023741	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.901
LOC109515023	DAG1	ENSHCOP00000008580	ENSHCOP00000011457	Peptidase S72 domain-containing protein.	Dystroglycan 1.	0.902
nlk	LOC109513808	ENSHCOP00000023741	ENSHCOP00000000891	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.901