(13 nodes) Nuclear pore nuclear basket network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mad2l1	MAD2 mitotic arrest deficient-like 1 (yeast). (202 aa)
	mcm3ap	Minichromosome maintenance complex component 3 associated protein. (2078 aa)
	cetn3	Centrin 3. (166 aa)
	mad1l1	Mitotic arrest deficient 1 like 1. (720 aa)
	ENSHCOP00000021751	Uncharacterized protein. (409 aa)
	ENSHCOP00000021676	Uncharacterized protein. (108 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (287 aa)
	LOC109523313	RAN binding protein 2. (2954 aa)
	nup153	Nucleoporin 153. (1441 aa)
	LOC109515476	Translocated promoter region a, nuclear basket protein. (2131 aa)
	Nup98	Uncharacterized protein. (357 aa)
	ENSHCOP00000006981	Peptidase S59 domain-containing protein. (292 aa)
	tpr	Translocated promoter region b, nuclear basket protein. (2348 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000006981	ENSHCOP00000021676	ENSHCOP00000006981	ENSHCOP00000021676	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.842
ENSHCOP00000006981	ENSHCOP00000021751	ENSHCOP00000006981	ENSHCOP00000021751	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.944
ENSHCOP00000006981	LOC109515476	ENSHCOP00000006981	ENSHCOP00000012752	Peptidase S59 domain-containing protein.	Translocated promoter region a, nuclear basket protein.	0.804
ENSHCOP00000006981	LOC109523313	ENSHCOP00000006981	ENSHCOP00000015909	Peptidase S59 domain-containing protein.	RAN binding protein 2.	0.995
ENSHCOP00000006981	Nup98	ENSHCOP00000006981	ENSHCOP00000006994	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.930
ENSHCOP00000006981	mad2l1	ENSHCOP00000006981	ENSHCOP00000004100	Peptidase S59 domain-containing protein.	MAD2 mitotic arrest deficient-like 1 (yeast).	0.498
ENSHCOP00000006981	mcm3ap	ENSHCOP00000006981	ENSHCOP00000000684	Peptidase S59 domain-containing protein.	Minichromosome maintenance complex component 3 associated protein.	0.408
ENSHCOP00000006981	nup153	ENSHCOP00000006981	ENSHCOP00000015707	Peptidase S59 domain-containing protein.	Nucleoporin 153.	0.910
ENSHCOP00000006981	nup35	ENSHCOP00000006981	ENSHCOP00000018937	Peptidase S59 domain-containing protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.842
ENSHCOP00000006981	tpr	ENSHCOP00000006981	ENSHCOP00000005111	Peptidase S59 domain-containing protein.	Translocated promoter region b, nuclear basket protein.	0.804
ENSHCOP00000021676	ENSHCOP00000006981	ENSHCOP00000021676	ENSHCOP00000006981	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.842
ENSHCOP00000021676	ENSHCOP00000021751	ENSHCOP00000021676	ENSHCOP00000021751	Uncharacterized protein.	Uncharacterized protein.	0.842
ENSHCOP00000021676	LOC109515476	ENSHCOP00000021676	ENSHCOP00000012752	Uncharacterized protein.	Translocated promoter region a, nuclear basket protein.	0.631
ENSHCOP00000021676	LOC109523313	ENSHCOP00000021676	ENSHCOP00000015909	Uncharacterized protein.	RAN binding protein 2.	0.983
ENSHCOP00000021676	Nup98	ENSHCOP00000021676	ENSHCOP00000006994	Uncharacterized protein.	Uncharacterized protein.	0.842
ENSHCOP00000021676	nup153	ENSHCOP00000021676	ENSHCOP00000015707	Uncharacterized protein.	Nucleoporin 153.	0.856
ENSHCOP00000021676	tpr	ENSHCOP00000021676	ENSHCOP00000005111	Uncharacterized protein.	Translocated promoter region b, nuclear basket protein.	0.631
ENSHCOP00000021751	ENSHCOP00000006981	ENSHCOP00000021751	ENSHCOP00000006981	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.944
ENSHCOP00000021751	ENSHCOP00000021676	ENSHCOP00000021751	ENSHCOP00000021676	Uncharacterized protein.	Uncharacterized protein.	0.842
ENSHCOP00000021751	LOC109515476	ENSHCOP00000021751	ENSHCOP00000012752	Uncharacterized protein.	Translocated promoter region a, nuclear basket protein.	0.804