37 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109531655	Apolipoprotein Eb. (297 aa)
	ENSHCOP00000019585	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family. (849 aa)
	PI4KA	Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family. (857 aa)
	PI4KA-2	Phosphatidylinositol 4-kinase alpha. (1053 aa)
	LOC109532531	Transcription factor AP-4 (activating enhancer binding protein 4). (317 aa)
	pc	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1163 aa)
	snw1	SNW domain containing 1. (536 aa)
	LOC109513534	Uncharacterized protein. (259 aa)
	LOC109514850	E1A binding protein p300 b. (2669 aa)
	YTHDC2	YTH domain containing 2. (1325 aa)
	ENSHCOP00000025426	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (301 aa)
	LOC109512016	Zgc:63863. (391 aa)
	LOC109506990	C-C motif chemokine. (91 aa)
	sap30bp	SAP30 binding protein. (313 aa)
	TFAP4	BHLH domain-containing protein. (323 aa)
	sp1	Sp1 transcription factor. (523 aa)
	LOC109507177	Uncharacterized protein. (118 aa)
	ENSHCOP00000003642	Uncharacterized protein. (170 aa)
	LOC109531653	Uncharacterized protein. (270 aa)
	ppib	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
	Hmga2	Uncharacterized protein. (98 aa)
	hpn	Hepsin; Belongs to the peptidase S1 family. (426 aa)
	LOC109512841	E1A binding protein p300 a. (2561 aa)
	eea1	Early endosome antigen 1. (1393 aa)
	ptx3	Pentraxin 3, long b. (472 aa)
	igf2r	Insulin-like growth factor 2 receptor. (1959 aa)
	tbc1d20	TBC1 domain family, member 20. (393 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	napepld	N-acyl phosphatidylethanolamine phospholipase D. (396 aa)
	LOC109516217	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (314 aa)
	LOC109528097	JunE proto-oncogene, AP-1 transcription factor subunit. (344 aa)
	phb	Prohibitin. (271 aa)
	LOC109532403	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (290 aa)
	ctdp1	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (905 aa)
	EIF2AK4	Eukaryotic translation initiation factor 2 alpha kinase 4. (1478 aa)
	zc3h12a	Si:dkey-206d17.12. (517 aa)
	lef1	Lymphoid enhancer-binding factor 1. (380 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000003642	ENSHCOP00000019585	ENSHCOP00000003642	ENSHCOP00000019585	Uncharacterized protein.	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	0.907
ENSHCOP00000003642	PI4KA	ENSHCOP00000003642	ENSHCOP00000020758	Uncharacterized protein.	Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.	0.906
ENSHCOP00000003642	PI4KA-2	ENSHCOP00000003642	ENSHCOP00000020795	Uncharacterized protein.	Phosphatidylinositol 4-kinase alpha.	0.902
ENSHCOP00000019585	ENSHCOP00000003642	ENSHCOP00000019585	ENSHCOP00000003642	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.907
ENSHCOP00000019585	PI4KA-2	ENSHCOP00000019585	ENSHCOP00000020795	Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4-kinase alpha.	0.944
LOC109512841	LOC109528097	ENSHCOP00000007909	ENSHCOP00000013147	E1A binding protein p300 a.	JunE proto-oncogene, AP-1 transcription factor subunit.	0.810
LOC109512841	LOC109532403	ENSHCOP00000007909	ENSHCOP00000014545	E1A binding protein p300 a.	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	0.810
LOC109512841	lef1	ENSHCOP00000007909	ENSHCOP00000019200	E1A binding protein p300 a.	Lymphoid enhancer-binding factor 1.	0.674
LOC109512841	snw1	ENSHCOP00000007909	ENSHCOP00000022906	E1A binding protein p300 a.	SNW domain containing 1.	0.662
LOC109512841	sp1	ENSHCOP00000007909	ENSHCOP00000000242	E1A binding protein p300 a.	Sp1 transcription factor.	0.953
LOC109514850	LOC109528097	ENSHCOP00000024673	ENSHCOP00000013147	E1A binding protein p300 b.	JunE proto-oncogene, AP-1 transcription factor subunit.	0.810
LOC109514850	LOC109532403	ENSHCOP00000024673	ENSHCOP00000014545	E1A binding protein p300 b.	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	0.810
LOC109514850	lef1	ENSHCOP00000024673	ENSHCOP00000019200	E1A binding protein p300 b.	Lymphoid enhancer-binding factor 1.	0.674
LOC109514850	snw1	ENSHCOP00000024673	ENSHCOP00000022906	E1A binding protein p300 b.	SNW domain containing 1.	0.662
LOC109514850	sp1	ENSHCOP00000024673	ENSHCOP00000000242	E1A binding protein p300 b.	Sp1 transcription factor.	0.953
LOC109528097	LOC109512841	ENSHCOP00000013147	ENSHCOP00000007909	JunE proto-oncogene, AP-1 transcription factor subunit.	E1A binding protein p300 a.	0.810
LOC109528097	LOC109514850	ENSHCOP00000013147	ENSHCOP00000024673	JunE proto-oncogene, AP-1 transcription factor subunit.	E1A binding protein p300 b.	0.810
LOC109528097	sp1	ENSHCOP00000013147	ENSHCOP00000000242	JunE proto-oncogene, AP-1 transcription factor subunit.	Sp1 transcription factor.	0.711
LOC109532403	LOC109512841	ENSHCOP00000014545	ENSHCOP00000007909	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	E1A binding protein p300 a.	0.810
LOC109532403	LOC109514850	ENSHCOP00000014545	ENSHCOP00000024673	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	E1A binding protein p300 b.	0.810