20 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nr1h4	Nuclear receptor subfamily 1, group H, member 4. (476 aa)
	LOC109512249	Zgc:153896. (449 aa)
	LOC109531655	Apolipoprotein Eb. (297 aa)
	LOC109531653	Uncharacterized protein. (270 aa)
	Enpp7	Ectonucleotide pyrophosphatase/phosphodiesterase 7. (432 aa)
	prkaa1	Non-specific serine/threonine protein kinase. (569 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	ENPP7	Uncharacterized protein. (434 aa)
	prkaa2	Non-specific serine/threonine protein kinase. (548 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	LOC109517754	Nuclear receptor subfamily 1, group H, member 5. (488 aa)
	ENPP7-2	Ectonucleotide pyrophosphatase/phosphodiesterase 7. (266 aa)
	GOT1	Aspartate aminotransferase. (410 aa)
	LOC109513534	Uncharacterized protein. (259 aa)
	pold1	DNA polymerase. (1105 aa)
	xbp1	X-box binding protein 1. (262 aa)
	ENSHCOP00000017784	Uncharacterized protein. (123 aa)
	got1	Aspartate aminotransferase. (410 aa)
	gpam	Glycerol-3-phosphate acyltransferase 1, mitochondrial. (722 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENPP7	ENSHCOP00000017784	ENSHCOP00000000946	ENSHCOP00000017784	Uncharacterized protein.	Uncharacterized protein.	0.903
ENPP7	Enpp7	ENSHCOP00000000946	ENSHCOP00000005708	Uncharacterized protein.	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	0.901
ENPP7	LOC109512249	ENSHCOP00000000946	ENSHCOP00000008237	Uncharacterized protein.	Zgc:153896.	0.903
ENPP7-2	ENSHCOP00000017784	ENSHCOP00000017787	ENSHCOP00000017784	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	Uncharacterized protein.	0.470
ENSHCOP00000017784	ENPP7	ENSHCOP00000017784	ENSHCOP00000000946	Uncharacterized protein.	Uncharacterized protein.	0.903
ENSHCOP00000017784	ENPP7-2	ENSHCOP00000017784	ENSHCOP00000017787	Uncharacterized protein.	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	0.470
ENSHCOP00000017784	Enpp7	ENSHCOP00000017784	ENSHCOP00000005708	Uncharacterized protein.	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	0.903
ENSHCOP00000017784	LOC109512249	ENSHCOP00000017784	ENSHCOP00000008237	Uncharacterized protein.	Zgc:153896.	0.904
Enpp7	ENPP7	ENSHCOP00000005708	ENSHCOP00000000946	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	Uncharacterized protein.	0.901
Enpp7	ENSHCOP00000017784	ENSHCOP00000005708	ENSHCOP00000017784	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	Uncharacterized protein.	0.903
Enpp7	LOC109512249	ENSHCOP00000005708	ENSHCOP00000008237	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	Zgc:153896.	0.902
GOT1	got1	ENSHCOP00000021740	ENSHCOP00000014822	Aspartate aminotransferase.	Aspartate aminotransferase.	0.901
LOC109512249	ENPP7	ENSHCOP00000008237	ENSHCOP00000000946	Zgc:153896.	Uncharacterized protein.	0.903
LOC109512249	ENSHCOP00000017784	ENSHCOP00000008237	ENSHCOP00000017784	Zgc:153896.	Uncharacterized protein.	0.904
LOC109512249	Enpp7	ENSHCOP00000008237	ENSHCOP00000005708	Zgc:153896.	Ectonucleotide pyrophosphatase/phosphodiesterase 7.	0.902
got1	GOT1	ENSHCOP00000014822	ENSHCOP00000021740	Aspartate aminotransferase.	Aspartate aminotransferase.	0.901
prkaa1	prkaa2	ENSHCOP00000004314	ENSHCOP00000026287	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.915
prkaa2	prkaa1	ENSHCOP00000026287	ENSHCOP00000004314	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.915