(13 nodes) Ubiquitin-protein transferase regulator activity network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	aup1	AUP1 lipid droplet regulating VLDL assembly factor. (414 aa)
	LOC109522748	Chromobox homolog 8a (Pc class homolog, Drosophila). (302 aa)
	FZR1	Fizzy/cell division cycle 20 related 1a. (495 aa)
	LOC109521384	Fizzy/cell division cycle 20 related 1b. (481 aa)
	LOC109521383	Fizzy/cell division cycle 20 related 1b. (481 aa)
	glmn	Glomulin, FKBP associated protein a. (603 aa)
	LOC109531588	Tribbles pseudokinase 1. (325 aa)
	LOC109521511	Protein kinase domain-containing protein. (358 aa)
	LOC109527520	Chromobox homolog 8b. (346 aa)
	cdc20	Cell division cycle 20 homolog. (503 aa)
	intu	Inturned planar cell polarity protein. (572 aa)
	LOC109516890	WD_REPEATS_REGION domain-containing protein. (488 aa)
	trib2	Tribbles pseudokinase 2. (337 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FZR1	cdc20	ENSHCOP00000017421	ENSHCOP00000010675	Fizzy/cell division cycle 20 related 1a.	Cell division cycle 20 homolog.	0.572
LOC109516890	cdc20	ENSHCOP00000006622	ENSHCOP00000010675	WD_REPEATS_REGION domain-containing protein.	Cell division cycle 20 homolog.	0.572
LOC109521383	cdc20	ENSHCOP00000019699	ENSHCOP00000010675	Fizzy/cell division cycle 20 related 1b.	Cell division cycle 20 homolog.	0.574
LOC109521384	cdc20	ENSHCOP00000019683	ENSHCOP00000010675	Fizzy/cell division cycle 20 related 1b.	Cell division cycle 20 homolog.	0.574
cdc20	FZR1	ENSHCOP00000010675	ENSHCOP00000017421	Cell division cycle 20 homolog.	Fizzy/cell division cycle 20 related 1a.	0.572
cdc20	LOC109516890	ENSHCOP00000010675	ENSHCOP00000006622	Cell division cycle 20 homolog.	WD_REPEATS_REGION domain-containing protein.	0.572
cdc20	LOC109521383	ENSHCOP00000010675	ENSHCOP00000019699	Cell division cycle 20 homolog.	Fizzy/cell division cycle 20 related 1b.	0.574
cdc20	LOC109521384	ENSHCOP00000010675	ENSHCOP00000019683	Cell division cycle 20 homolog.	Fizzy/cell division cycle 20 related 1b.	0.574