STRINGSTRING
otud5 otud5 LOC109512256 LOC109512256 babam1 babam1 Brcc3 Brcc3 spata2 spata2 otud4 otud4 abraxas2 abraxas2 usp16 usp16 LOC109521498 LOC109521498 LOC109516522 LOC109516522 tnfaip3 tnfaip3 Usp20 Usp20 usp8 usp8 cyld cyld usp33 usp33 stambp stambp psmd14 psmd14 usp7 usp7 yod1 yod1 ENSHCOP00000017675 ENSHCOP00000017675 usp13 usp13 zranb1 zranb1 ZRANB1 ZRANB1 otud7a otud7a otud1 otud1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
otud5OTU deubiquitinase 5a. (506 aa)
LOC109512256OTU deubiquitinase 7B. (831 aa)
babam1BRISC and BRCA1 A complex member 1. (373 aa)
Brcc3BRCA1/BRCA2-containing complex, subunit 3. (284 aa)
spata2Spermatogenesis associated 2. (568 aa)
otud4OTU domain-containing protein. (892 aa)
abraxas2Abraxas 2, BRISC complex subunit. (437 aa)
usp16Ubiquitin carboxyl-terminal hydrolase. (807 aa)
LOC109521498Cylindromatosis (turban tumor syndrome), b. (711 aa)
LOC109516522Uncharacterized protein. (727 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (753 aa)
Usp20Ubiquitin specific peptidase 20; Belongs to the peptidase C19 family. (319 aa)
usp8Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family. (1072 aa)
cyldCylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (771 aa)
usp33Ubiquitin carboxyl-terminal hydrolase. (888 aa)
stambpSTAM binding protein b. (471 aa)
psmd14Proteasome 26S subunit, non-ATPase 14. (310 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1111 aa)
yod1YOD1 deubiquitinase. (299 aa)
ENSHCOP00000017675UBP-type domain-containing protein. (357 aa)
usp13Ubiquitinyl hydrolase 1. (864 aa)
zranb1Zinc finger, RAN-binding domain containing 1a. (714 aa)
ZRANB1Zinc finger RANBP2-type containing 1. (746 aa)
otud7aOTU deubiquitinase 7A. (945 aa)
otud1OTU deubiquitinase 1. (372 aa)
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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