26 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109524840	Jun dimerization protein 2b. (163 aa)
	sdr16c5	Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (321 aa)
	mbip	MAP3K12 binding inhibitory protein 1. (331 aa)
	LOC109514850	E1A binding protein p300 b. (2669 aa)
	prkaa2	Non-specific serine/threonine protein kinase. (548 aa)
	tada2a	Transcriptional adapter. (473 aa)
	sap30bp	SAP30 binding protein. (313 aa)
	zzz3	Zinc finger, ZZ-type containing 3. (944 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	prkaa1	Non-specific serine/threonine protein kinase. (569 aa)
	ENSHCOP00000004854	Down-regulator of transcription 1. (180 aa)
	LOC109512841	E1A binding protein p300 a. (2561 aa)
	ENSHCOP00000009272	Lysine acetyltransferase 14. (531 aa)
	yeats2	YEATS domain containing 2. (1386 aa)
	fnta	Farnesyltransferase, CAAX box, alpha. (368 aa)
	rrp8	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (515 aa)
	Ucn	CRF domain-containing protein. (134 aa)
	JDP2	Jun dimerization protein 2. (208 aa)
	TPPP	Tubulin polymerization promoting protein. (217 aa)
	ENSHCOP00000013336	Protein kinase domain-containing protein. (472 aa)
	ENSHCOP00000013347	Uncharacterized protein. (1158 aa)
	LOC109510758	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	sgf29	SAGA complex associated factor 29. (315 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	LOC109524968	Zinc finger protein 703. (580 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000004854	ENSHCOP00000009272	ENSHCOP00000004854	ENSHCOP00000009272	Down-regulator of transcription 1.	Lysine acetyltransferase 14.	0.950
ENSHCOP00000004854	mbip	ENSHCOP00000004854	ENSHCOP00000024467	Down-regulator of transcription 1.	MAP3K12 binding inhibitory protein 1.	0.899
ENSHCOP00000004854	sgf29	ENSHCOP00000004854	ENSHCOP00000017882	Down-regulator of transcription 1.	SAGA complex associated factor 29.	0.915
ENSHCOP00000004854	tada2a	ENSHCOP00000004854	ENSHCOP00000027166	Down-regulator of transcription 1.	Transcriptional adapter.	0.940
ENSHCOP00000004854	yeats2	ENSHCOP00000004854	ENSHCOP00000009629	Down-regulator of transcription 1.	YEATS domain containing 2.	0.943
ENSHCOP00000004854	zzz3	ENSHCOP00000004854	ENSHCOP00000028405	Down-regulator of transcription 1.	Zinc finger, ZZ-type containing 3.	0.783
ENSHCOP00000009272	ENSHCOP00000004854	ENSHCOP00000009272	ENSHCOP00000004854	Lysine acetyltransferase 14.	Down-regulator of transcription 1.	0.950
ENSHCOP00000009272	mbip	ENSHCOP00000009272	ENSHCOP00000024467	Lysine acetyltransferase 14.	MAP3K12 binding inhibitory protein 1.	0.876
ENSHCOP00000009272	sgf29	ENSHCOP00000009272	ENSHCOP00000017882	Lysine acetyltransferase 14.	SAGA complex associated factor 29.	0.997
ENSHCOP00000009272	tada2a	ENSHCOP00000009272	ENSHCOP00000027166	Lysine acetyltransferase 14.	Transcriptional adapter.	0.913
ENSHCOP00000009272	yeats2	ENSHCOP00000009272	ENSHCOP00000009629	Lysine acetyltransferase 14.	YEATS domain containing 2.	0.972
ENSHCOP00000009272	zzz3	ENSHCOP00000009272	ENSHCOP00000028405	Lysine acetyltransferase 14.	Zinc finger, ZZ-type containing 3.	0.970
ENSHCOP00000013336	ENSHCOP00000013347	ENSHCOP00000013336	ENSHCOP00000013347	Protein kinase domain-containing protein.	Uncharacterized protein.	0.945
ENSHCOP00000013347	ENSHCOP00000013336	ENSHCOP00000013347	ENSHCOP00000013336	Uncharacterized protein.	Protein kinase domain-containing protein.	0.945
ENSHCOP00000019285	LOC109512841	ENSHCOP00000019285	ENSHCOP00000007909	Deacetylase sirtuin-type domain-containing protein.	E1A binding protein p300 a.	0.442
ENSHCOP00000019285	LOC109514850	ENSHCOP00000019285	ENSHCOP00000024673	Deacetylase sirtuin-type domain-containing protein.	E1A binding protein p300 b.	0.442
ENSHCOP00000019285	rrp8	ENSHCOP00000019285	ENSHCOP00000000469	Deacetylase sirtuin-type domain-containing protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.741
ENSHCOP00000019306	LOC109512841	ENSHCOP00000019306	ENSHCOP00000007909	Sirtuin 1.	E1A binding protein p300 a.	0.442
ENSHCOP00000019306	LOC109514850	ENSHCOP00000019306	ENSHCOP00000024673	Sirtuin 1.	E1A binding protein p300 b.	0.442
ENSHCOP00000019306	rrp8	ENSHCOP00000019306	ENSHCOP00000000469	Sirtuin 1.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.741