24 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHCOP00000008455	Melanocortin 2 receptor accessory protein 2b. (219 aa)
	prkaa2	Non-specific serine/threonine protein kinase. (548 aa)
	flcn	Folliculin. (550 aa)
	LOC109522595	Nuclear receptor subfamily 1, group D, member 4b. (570 aa)
	ENSHCOP00000012204	C1q domain-containing protein. (111 aa)
	ppargc1a	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (915 aa)
	sqstm1	Sequestosome 1. (407 aa)
	SLC35D3	Solute carrier family 35 member D3. (381 aa)
	LOC109509348	C1q and TNF related 9. (205 aa)
	pask	PAS domain containing serine/threonine kinase. (1042 aa)
	oma1	OMA1 zinc metallopeptidase. (326 aa)
	metrnl	Meteorin like, glial cell differentiation regulator a. (297 aa)
	ENSHCOP00000006555	Melanocortin 4 receptor. (326 aa)
	CRTC1	CREB regulated transcription coactivator 1b. (564 aa)
	prkaa1	Non-specific serine/threonine protein kinase. (569 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	rrp8	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (515 aa)
	irx3	Iroquois homeobox 3a. (429 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	nr1d2	Nuclear receptor subfamily 1, group D, member 2a. (588 aa)
	LOC109519035	Leptin receptor. (1118 aa)
	pm20d1	Peptidase M20 domain containing 1, tandem duplicate 2. (505 aa)
	tsku	Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis). (351 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000006555	ENSHCOP00000008455	ENSHCOP00000006555	ENSHCOP00000008455	Melanocortin 4 receptor.	Melanocortin 2 receptor accessory protein 2b.	0.638
ENSHCOP00000006555	LOC109519035	ENSHCOP00000006555	ENSHCOP00000020185	Melanocortin 4 receptor.	Leptin receptor.	0.598
ENSHCOP00000008455	ENSHCOP00000006555	ENSHCOP00000008455	ENSHCOP00000006555	Melanocortin 2 receptor accessory protein 2b.	Melanocortin 4 receptor.	0.638
ENSHCOP00000019285	ppargc1a	ENSHCOP00000019285	ENSHCOP00000011947	Deacetylase sirtuin-type domain-containing protein.	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.	0.603
ENSHCOP00000019285	rrp8	ENSHCOP00000019285	ENSHCOP00000000469	Deacetylase sirtuin-type domain-containing protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.741
ENSHCOP00000019306	ppargc1a	ENSHCOP00000019306	ENSHCOP00000011947	Sirtuin 1.	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.	0.603
ENSHCOP00000019306	rrp8	ENSHCOP00000019306	ENSHCOP00000000469	Sirtuin 1.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.741
LOC109519035	ENSHCOP00000006555	ENSHCOP00000020185	ENSHCOP00000006555	Leptin receptor.	Melanocortin 4 receptor.	0.598
LOC109523155	ppargc1a	ENSHCOP00000003219	ENSHCOP00000011947	Sirtuin 1.	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.	0.603
LOC109523155	rrp8	ENSHCOP00000003219	ENSHCOP00000000469	Sirtuin 1.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.741
ppargc1a	ENSHCOP00000019285	ENSHCOP00000011947	ENSHCOP00000019285	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.	Deacetylase sirtuin-type domain-containing protein.	0.603
ppargc1a	ENSHCOP00000019306	ENSHCOP00000011947	ENSHCOP00000019306	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.	Sirtuin 1.	0.603
ppargc1a	LOC109523155	ENSHCOP00000011947	ENSHCOP00000003219	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.	Sirtuin 1.	0.603
prkaa1	prkaa2	ENSHCOP00000004314	ENSHCOP00000026287	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.915
prkaa2	prkaa1	ENSHCOP00000026287	ENSHCOP00000004314	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.915
rrp8	ENSHCOP00000019285	ENSHCOP00000000469	ENSHCOP00000019285	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	Deacetylase sirtuin-type domain-containing protein.	0.741
rrp8	ENSHCOP00000019306	ENSHCOP00000000469	ENSHCOP00000019306	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	Sirtuin 1.	0.741
rrp8	LOC109523155	ENSHCOP00000000469	ENSHCOP00000003219	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	Sirtuin 1.	0.741