(20 nodes) Synaptic membrane adhesion network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHCOP00000008546	Fibronectin type-III domain-containing protein. (179 aa)
	NTNG2	Uncharacterized protein. (583 aa)
	SLITRK1	SLIT and NTRK like family member 1. (707 aa)
	LOC109523178	Leucine rich repeat and fibronectin type III domain containing 5b. (794 aa)
	lrfn5	Leucine rich repeat and fibronectin type III domain containing 5a. (545 aa)
	ENSHCOP00000022816	Uncharacterized protein. (250 aa)
	ENSHCOP00000022786	Uncharacterized protein. (460 aa)
	ENSHCOP00000022280	Leucine rich repeat and fibronectin type III domain containing 4b. (398 aa)
	LOC109518985	Protein tyrosine phosphatase receptor type Sa. (1463 aa)
	LOC109507374	Protein tyrosine phosphatase receptor type Fb. (1743 aa)
	LOC109507311	Protein tyrosine phosphatase receptor type Sa. (1449 aa)
	ENSHCOP00000017013	Uncharacterized protein. (430 aa)
	ENSHCOP00000014370	Uncharacterized protein. (99 aa)
	ntng1	Netrin g1a. (443 aa)
	PTPRD	Protein tyrosine phosphatase receptor type D. (1779 aa)
	LOC109511127	Uncharacterized protein. (1499 aa)
	flrt3	Fibronectin leucine rich transmembrane 3. (650 aa)
	ENSHCOP00000004715	Ig-like domain-containing protein. (152 aa)
	ENSHCOP00000001118	Vav 3 guanine nucleotide exchange factor b. (465 aa)
	LOC109517156	Netrin G2. (521 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000001118	ENSHCOP00000022280	ENSHCOP00000001118	ENSHCOP00000022280	Vav 3 guanine nucleotide exchange factor b.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.522
ENSHCOP00000001118	SLITRK1	ENSHCOP00000001118	ENSHCOP00000024604	Vav 3 guanine nucleotide exchange factor b.	SLIT and NTRK like family member 1.	0.480
ENSHCOP00000001118	flrt3	ENSHCOP00000001118	ENSHCOP00000008994	Vav 3 guanine nucleotide exchange factor b.	Fibronectin leucine rich transmembrane 3.	0.400
ENSHCOP00000004715	ENSHCOP00000017013	ENSHCOP00000004715	ENSHCOP00000017013	Ig-like domain-containing protein.	Uncharacterized protein.	0.668
ENSHCOP00000004715	ENSHCOP00000022280	ENSHCOP00000004715	ENSHCOP00000022280	Ig-like domain-containing protein.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.492
ENSHCOP00000004715	ENSHCOP00000022786	ENSHCOP00000004715	ENSHCOP00000022786	Ig-like domain-containing protein.	Uncharacterized protein.	0.898
ENSHCOP00000004715	LOC109523178	ENSHCOP00000004715	ENSHCOP00000024400	Ig-like domain-containing protein.	Leucine rich repeat and fibronectin type III domain containing 5b.	0.496
ENSHCOP00000004715	PTPRD	ENSHCOP00000004715	ENSHCOP00000013842	Ig-like domain-containing protein.	Protein tyrosine phosphatase receptor type D.	0.878
ENSHCOP00000004715	SLITRK1	ENSHCOP00000004715	ENSHCOP00000024604	Ig-like domain-containing protein.	SLIT and NTRK like family member 1.	0.593
ENSHCOP00000004715	lrfn5	ENSHCOP00000004715	ENSHCOP00000022828	Ig-like domain-containing protein.	Leucine rich repeat and fibronectin type III domain containing 5a.	0.496
ENSHCOP00000008546	ENSHCOP00000017013	ENSHCOP00000008546	ENSHCOP00000017013	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.668
ENSHCOP00000008546	ENSHCOP00000022280	ENSHCOP00000008546	ENSHCOP00000022280	Fibronectin type-III domain-containing protein.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.492
ENSHCOP00000008546	LOC109523178	ENSHCOP00000008546	ENSHCOP00000024400	Fibronectin type-III domain-containing protein.	Leucine rich repeat and fibronectin type III domain containing 5b.	0.496
ENSHCOP00000008546	SLITRK1	ENSHCOP00000008546	ENSHCOP00000024604	Fibronectin type-III domain-containing protein.	SLIT and NTRK like family member 1.	0.593
ENSHCOP00000008546	lrfn5	ENSHCOP00000008546	ENSHCOP00000022828	Fibronectin type-III domain-containing protein.	Leucine rich repeat and fibronectin type III domain containing 5a.	0.496
ENSHCOP00000014370	ENSHCOP00000017013	ENSHCOP00000014370	ENSHCOP00000017013	Uncharacterized protein.	Uncharacterized protein.	0.668
ENSHCOP00000014370	ENSHCOP00000022280	ENSHCOP00000014370	ENSHCOP00000022280	Uncharacterized protein.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.492
ENSHCOP00000014370	LOC109523178	ENSHCOP00000014370	ENSHCOP00000024400	Uncharacterized protein.	Leucine rich repeat and fibronectin type III domain containing 5b.	0.496
ENSHCOP00000014370	SLITRK1	ENSHCOP00000014370	ENSHCOP00000024604	Uncharacterized protein.	SLIT and NTRK like family member 1.	0.593
ENSHCOP00000014370	lrfn5	ENSHCOP00000014370	ENSHCOP00000022828	Uncharacterized protein.	Leucine rich repeat and fibronectin type III domain containing 5a.	0.496