STRINGSTRING
atrx atrx LOC109518926 LOC109518926 LOC109519046 LOC109519046 kdm4c kdm4c mecp2 mecp2 ENSHCOP00000019285 ENSHCOP00000019285 ENSHCOP00000019306 ENSHCOP00000019306 kdm4a kdm4a ENSHCOP00000005103 ENSHCOP00000005103 LOC109523155 LOC109523155
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atrxATRX chromatin remodeler. (1645 aa)
LOC109518926Uncharacterized protein. (1119 aa)
LOC109519046Lysine (K)-specific demethylase 4B. (1046 aa)
kdm4cLysine (K)-specific demethylase 4C. (1618 aa)
mecp2Methyl CpG binding protein 2. (848 aa)
ENSHCOP00000019285Deacetylase sirtuin-type domain-containing protein. (166 aa)
ENSHCOP00000019306Sirtuin 1. (369 aa)
kdm4aLysine (K)-specific demethylase 4A, genome duplicate a. (1022 aa)
ENSHCOP00000005103Uncharacterized protein. (167 aa)
LOC109523155Sirtuin 1. (657 aa)
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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