45 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hspa5	Heat shock protein 5; Belongs to the heat shock protein 70 family. (650 aa)
	wfs1	Uncharacterized protein. (382 aa)
	mbtps2	Membrane-bound transcription factor peptidase, site 2. (491 aa)
	LOC109526246	Transmembrane protein 33. (246 aa)
	atf6b	BZIP domain-containing protein. (659 aa)
	LOC109523155	Sirtuin 1. (657 aa)
	nupr1	Nuclear protein 1b. (74 aa)
	rnft2	Ring finger protein, transmembrane 2. (439 aa)
	txndc12	Thioredoxin domain containing 12 (endoplasmic reticulum). (207 aa)
	nck1	Cytoplasmic protein. (393 aa)
	dgat2	Diacylglycerol O-acyltransferase 2. (361 aa)
	trappc11	Trafficking protein particle complex 11. (987 aa)
	eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3. (1106 aa)
	LOC109517508	cAMP responsive element binding protein 3-like 3 like. (497 aa)
	manf	Mesencephalic astrocyte-derived neurotrophic factor. (160 aa)
	LOC109530914	DnaJ heat shock protein family (Hsp40) member B9a. (211 aa)
	ENSHCOP00000013336	Protein kinase domain-containing protein. (472 aa)
	ENSHCOP00000013347	Uncharacterized protein. (1158 aa)
	lpcat3	Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. (480 aa)
	LOC109530841	Protein phosphatase 1, regulatory subunit 15B. (388 aa)
	pdx1	Pancreatic and duodenal homeobox 1. (250 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (498 aa)
	nr1h3	Nuclear receptor subfamily 1, group H, member 3. (462 aa)
	svip	Si:ch73-147o17.1. (81 aa)
	ENSHCOP00000016349	Nuclear protein 1a. (76 aa)
	BFAR	Bifunctional apoptosis regulator. (480 aa)
	LOC109514592	Tyrosine-protein phosphatase non-receptor type. (368 aa)
	nck2	NCK adaptor protein 2a. (189 aa)
	ENSHCOP00000019285	Deacetylase sirtuin-type domain-containing protein. (166 aa)
	ENSHCOP00000019306	Sirtuin 1. (369 aa)
	ENSHCOP00000019979	Uncharacterized protein. (134 aa)
	LOC109508060	Zgc:153993. (204 aa)
	dnajb9	DnaJ heat shock protein family (Hsp40) member B9b. (217 aa)
	Ufl1	UFM1-specific ligase 1. (727 aa)
	AQP11	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. (271 aa)
	LOC109526882	Tyrosine-protein phosphatase non-receptor type. (406 aa)
	rnft1	Ring finger protein, transmembrane 1. (406 aa)
	LOC109511429	Wolfram syndrome 1a (wolframin). (742 aa)
	xbp1	X-box binding protein 1. (262 aa)
	bax	BCL2 associated X, apoptosis regulator a. (255 aa)
	ddrgk1	Uncharacterized protein. (308 aa)
	atf6	Activating transcription factor 6. (643 aa)
	ENSHCOP00000027903	annotation not available (76 aa)
	tmem259	Transmembrane protein 259. (562 aa)
	ptpn2	Tyrosine-protein phosphatase non-receptor type. (411 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000013336	ENSHCOP00000013347	ENSHCOP00000013336	ENSHCOP00000013347	Protein kinase domain-containing protein.	Uncharacterized protein.	0.945
ENSHCOP00000013347	ENSHCOP00000013336	ENSHCOP00000013347	ENSHCOP00000013336	Uncharacterized protein.	Protein kinase domain-containing protein.	0.945
LOC109508060	bax	ENSHCOP00000020948	ENSHCOP00000026539	Zgc:153993.	BCL2 associated X, apoptosis regulator a.	0.988
LOC109511429	xbp1	ENSHCOP00000024397	ENSHCOP00000025002	Wolfram syndrome 1a (wolframin).	X-box binding protein 1.	0.589
LOC109514592	nck1	ENSHCOP00000018627	ENSHCOP00000009192	Tyrosine-protein phosphatase non-receptor type.	Cytoplasmic protein.	0.405
LOC109514592	nck2	ENSHCOP00000018627	ENSHCOP00000018974	Tyrosine-protein phosphatase non-receptor type.	NCK adaptor protein 2a.	0.405
LOC109517508	mbtps2	ENSHCOP00000011208	ENSHCOP00000009006	cAMP responsive element binding protein 3-like 3 like.	Membrane-bound transcription factor peptidase, site 2.	0.748
LOC109526882	nck1	ENSHCOP00000022402	ENSHCOP00000009192	Tyrosine-protein phosphatase non-receptor type.	Cytoplasmic protein.	0.405
LOC109526882	nck2	ENSHCOP00000022402	ENSHCOP00000018974	Tyrosine-protein phosphatase non-receptor type.	NCK adaptor protein 2a.	0.405
LOC109530841	eif2ak3	ENSHCOP00000014097	ENSHCOP00000010739	Protein phosphatase 1, regulatory subunit 15B.	Eukaryotic translation initiation factor 2-alpha kinase 3.	0.582
LOC109530914	hspa5	ENSHCOP00000012527	ENSHCOP00000001935	DnaJ heat shock protein family (Hsp40) member B9a.	Heat shock protein 5; Belongs to the heat shock protein 70 family.	0.889
LOC109530914	manf	ENSHCOP00000012527	ENSHCOP00000011438	DnaJ heat shock protein family (Hsp40) member B9a.	Mesencephalic astrocyte-derived neurotrophic factor.	0.450
LOC109530914	xbp1	ENSHCOP00000012527	ENSHCOP00000025002	DnaJ heat shock protein family (Hsp40) member B9a.	X-box binding protein 1.	0.604
Ufl1	ddrgk1	ENSHCOP00000021560	ENSHCOP00000026976	UFM1-specific ligase 1.	Uncharacterized protein.	0.958
atf6	eif2ak3	ENSHCOP00000027362	ENSHCOP00000010739	Activating transcription factor 6.	Eukaryotic translation initiation factor 2-alpha kinase 3.	0.583
atf6	hspa5	ENSHCOP00000027362	ENSHCOP00000001935	Activating transcription factor 6.	Heat shock protein 5; Belongs to the heat shock protein 70 family.	0.784
atf6	mbtps2	ENSHCOP00000027362	ENSHCOP00000009006	Activating transcription factor 6.	Membrane-bound transcription factor peptidase, site 2.	0.783
atf6	xbp1	ENSHCOP00000027362	ENSHCOP00000025002	Activating transcription factor 6.	X-box binding protein 1.	0.910
atf6b	eif2ak3	ENSHCOP00000007122	ENSHCOP00000010739	BZIP domain-containing protein.	Eukaryotic translation initiation factor 2-alpha kinase 3.	0.574
atf6b	hspa5	ENSHCOP00000007122	ENSHCOP00000001935	BZIP domain-containing protein.	Heat shock protein 5; Belongs to the heat shock protein 70 family.	0.784