21 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	myo10	Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1675 aa)
	LOC109521915	Cordon-bleu WH2 repeat protein. (1443 aa)
	LOC109519189	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1947 aa)
	ENSHCOP00000002404	Si:dkey-280e21.3. (292 aa)
	LOC109528323	Uncharacterized protein. (1237 aa)
	LOC109514115	Syntaphilin b. (517 aa)
	LOC109513038	Uncharacterized protein. (517 aa)
	ENSHCOP00000007475	Uncharacterized protein. (600 aa)
	flrt3	Fibronectin leucine rich transmembrane 3. (650 aa)
	LOC109520216	L1 cell adhesion molecule, paralog a. (1202 aa)
	Myo10	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (276 aa)
	NEO1	Neogenin 1. (1180 aa)
	Neo1	Ig-like domain-containing protein. (108 aa)
	LOC109521690	Uncharacterized protein. (250 aa)
	ENSHCOP00000020278	MyTH4 domain-containing protein. (144 aa)
	c9orf72	Zgc:100846. (443 aa)
	LOC109524482	Glycoprotein M6Aa. (267 aa)
	ENSHCOP00000022822	MyTH4 domain-containing protein. (464 aa)
	ENSHCOP00000022825	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1043 aa)
	dcc	DCC netrin 1 receptor. (1445 aa)
	LOC109517227	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1426 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000002404	LOC109520216	ENSHCOP00000002404	ENSHCOP00000009519	Si:dkey-280e21.3.	L1 cell adhesion molecule, paralog a.	0.406
ENSHCOP00000002404	LOC109528323	ENSHCOP00000002404	ENSHCOP00000003757	Si:dkey-280e21.3.	Uncharacterized protein.	0.406
ENSHCOP00000020278	ENSHCOP00000022825	ENSHCOP00000020278	ENSHCOP00000022825	MyTH4 domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.780
ENSHCOP00000022822	ENSHCOP00000022825	ENSHCOP00000022822	ENSHCOP00000022825	MyTH4 domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.833
ENSHCOP00000022822	Myo10	ENSHCOP00000022822	ENSHCOP00000009535	MyTH4 domain-containing protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.725
ENSHCOP00000022825	ENSHCOP00000020278	ENSHCOP00000022825	ENSHCOP00000020278	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	MyTH4 domain-containing protein.	0.780
ENSHCOP00000022825	ENSHCOP00000022822	ENSHCOP00000022825	ENSHCOP00000022822	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	MyTH4 domain-containing protein.	0.833
ENSHCOP00000022825	Myo10	ENSHCOP00000022825	ENSHCOP00000009535	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.511
LOC109517227	Myo10	ENSHCOP00000028071	ENSHCOP00000009535	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.916
LOC109520216	ENSHCOP00000002404	ENSHCOP00000009519	ENSHCOP00000002404	L1 cell adhesion molecule, paralog a.	Si:dkey-280e21.3.	0.406
LOC109528323	ENSHCOP00000002404	ENSHCOP00000003757	ENSHCOP00000002404	Uncharacterized protein.	Si:dkey-280e21.3.	0.406
Myo10	ENSHCOP00000022822	ENSHCOP00000009535	ENSHCOP00000022822	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	MyTH4 domain-containing protein.	0.725
Myo10	ENSHCOP00000022825	ENSHCOP00000009535	ENSHCOP00000022825	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.511
Myo10	LOC109517227	ENSHCOP00000009535	ENSHCOP00000028071	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.916
Myo10	myo10	ENSHCOP00000009535	ENSHCOP00000023454	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.916
NEO1	Neo1	ENSHCOP00000014708	ENSHCOP00000014714	Neogenin 1.	Ig-like domain-containing protein.	0.900
Neo1	NEO1	ENSHCOP00000014714	ENSHCOP00000014708	Ig-like domain-containing protein.	Neogenin 1.	0.900
myo10	Myo10	ENSHCOP00000023454	ENSHCOP00000009535	Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.916