(28 nodes) ATPase, AAA-type, conserved site network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	nvl	Nuclear VCP like. (848 aa)
	LOC109520521	YME1-like 1b. (719 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
	atad2b	ATPase family AAA domain containing 2B. (1317 aa)
	atad1	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family. (395 aa)
	Fignl1	Fidgetin-like 1; Belongs to the AAA ATPase family. (643 aa)
	atad2	ATPase family AAA domain containing 2. (886 aa)
	spast	Spastin; Belongs to the AAA ATPase family. (471 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	yme1l1	YME1-like 1a. (711 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	afg3l2	AFG3-like AAA ATPase 2. (794 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	LOC109525064	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family. (370 aa)
	SPATA5	Spermatogenesis associated 5. (887 aa)
	LOC109517562	BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family. (441 aa)
	pex6	AAA domain-containing protein. (885 aa)
	LOC109531576	AAA domain-containing protein; Belongs to the AAA ATPase family. (658 aa)
	LOC109530164	N-ethylmaleimide-sensitive factor b. (775 aa)
	katna1	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (585 aa)
	LOC109531316	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (492 aa)
	LOC109507928	Si:ch1073-174d20.2. (719 aa)
	NSF	N-ethylmaleimide sensitive factor, vesicle fusing ATPase; Belongs to the AAA ATPase family. (699 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	trip13	Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family. (422 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fignl1	VPS4B	ENSHCOP00000004116	ENSHCOP00000002421	Fidgetin-like 1; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.423
LOC109517562	LOC109530164	ENSHCOP00000020465	ENSHCOP00000025709	BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.	N-ethylmaleimide-sensitive factor b.	0.414
LOC109517562	NSF	ENSHCOP00000020465	ENSHCOP00000022176	BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.	N-ethylmaleimide sensitive factor, vesicle fusing ATPase; Belongs to the AAA ATPase family.	0.414
LOC109525064	psmc6	ENSHCOP00000018461	ENSHCOP00000010200	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.453
LOC109530164	LOC109517562	ENSHCOP00000025709	ENSHCOP00000020465	N-ethylmaleimide-sensitive factor b.	BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.	0.414
LOC109531316	psmc3	ENSHCOP00000021916	ENSHCOP00000011629	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.686
LOC109531316	psmc4	ENSHCOP00000021916	ENSHCOP00000009820	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.678
LOC109531316	psmc6	ENSHCOP00000021916	ENSHCOP00000010200	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.681
NSF	LOC109517562	ENSHCOP00000022176	ENSHCOP00000020465	N-ethylmaleimide sensitive factor, vesicle fusing ATPase; Belongs to the AAA ATPase family.	BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.	0.414
SPATA5	psmc1	ENSHCOP00000019051	ENSHCOP00000015971	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.746
SPATA5	psmc2	ENSHCOP00000019051	ENSHCOP00000023639	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.650
SPATA5	psmc3	ENSHCOP00000019051	ENSHCOP00000011629	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.729
SPATA5	psmc4	ENSHCOP00000019051	ENSHCOP00000009820	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.675
SPATA5	psmc5	ENSHCOP00000019051	ENSHCOP00000014246	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.683
SPATA5	psmc6	ENSHCOP00000019051	ENSHCOP00000010200	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.614
VPS4B	Fignl1	ENSHCOP00000002421	ENSHCOP00000004116	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Fidgetin-like 1; Belongs to the AAA ATPase family.	0.423
VPS4B	spast	ENSHCOP00000002421	ENSHCOP00000008638	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Spastin; Belongs to the AAA ATPase family.	0.426
atad1	psmc3	ENSHCOP00000003670	ENSHCOP00000011629	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.408
atad1	psmc6	ENSHCOP00000003670	ENSHCOP00000010200	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.467
atad2	psmc3	ENSHCOP00000007791	ENSHCOP00000011629	ATPase family AAA domain containing 2.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.653