STRINGSTRING
psmc5 psmc5 ssbp1 ssbp1 dars1 dars1 ten1 ten1 psmc1 psmc1 exosc1 exosc1 LOC109530003 LOC109530003 ENSHCOP00000028399 ENSHCOP00000028399 dis3l2 dis3l2 stn1 stn1 eif1ad eif1ad ENSHCOP00000019054 ENSHCOP00000019054 aimp1 aimp1 LOC109520371 LOC109520371 LOC109511132 LOC109511132 dis3l dis3l nabp1 nabp1 RPS11 RPS11 ENSHCOP00000020772 ENSHCOP00000020772 Mrps17 Mrps17 LOC109512337 LOC109512337 lig4 lig4 psmc2 psmc2 lig1 lig1 dars2 dars2 rpl8 rpl8 rpa3 rpa3 pdcd11 pdcd11 ENSHCOP00000025687 ENSHCOP00000025687 LOC109514992 LOC109514992 LOC109510174 LOC109510174 LOC109510163 LOC109510163 exosc2 exosc2 ENSHCOP00000027456 ENSHCOP00000027456 mcm4 mcm4 ENSHCOP00000028059 ENSHCOP00000028059 mcm8 mcm8 mrpl2 mrpl2 ENSHCOP00000028329 ENSHCOP00000028329 rpa1 rpa1 spout1 spout1 meiob meiob LOC109509975 LOC109509975 nars1 nars1 PNPT1 PNPT1 kars1 kars1 mcm3 mcm3 CSDE1 CSDE1 zcchc17 zcchc17 eif2s1 eif2s1 LOC109507144 LOC109507144 rps28 rps28 mcm9 mcm9 rmi2 rmi2 lin28a lin28a yars1 yars1 rpa2 rpa2 CSDC2 CSDC2 polr3h polr3h LOC109512334 LOC109512334 rngtt rngtt mcm7 mcm7 LOC109518782 LOC109518782 EIF5AL1 EIF5AL1 polr2g polr2g ENSHCOP00000007765 ENSHCOP00000007765 pot1 pot1 ENSHCOP00000007916 ENSHCOP00000007916 lig3 lig3 LOC109524545 LOC109524545 LOC109519125 LOC109519125 mrps12 mrps12 LOC109516819 LOC109516819 nars2 nars2 mcm10 mcm10 mcm2 mcm2 mcm6 mcm6 LOC109517068 LOC109517068 psmc4 psmc4 ENSHCOP00000010133 ENSHCOP00000010133 psmc6 psmc6 exosc3 exosc3 rps23 rps23 LOC109517288 LOC109517288 psmc3 psmc3 LOC109529747 LOC109529747 MCMDC2 MCMDC2 ENSHCOP00000012959 ENSHCOP00000012959 dhx8 dhx8 ybx1 ybx1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psmc5Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
ssbp1Single-stranded DNA binding protein 1. (147 aa)
dars1Aspartyl-tRNA synthetase. (534 aa)
ten1TEN1 subunit of CST complex. (143 aa)
psmc1Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
exosc1Exosome component 1. (194 aa)
LOC109530003Calcium regulated heat stable protein 1. (150 aa)
ENSHCOP00000028399S1 motif domain-containing protein. (146 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (946 aa)
stn1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (360 aa)
eif1adEukaryotic translation initiation factor 1A domain containing. (168 aa)
ENSHCOP00000019054Cell division cycle and apoptosis regulator 1. (1124 aa)
aimp1Aminoacyl tRNA synthetase complex interacting multifunctional protein 1a. (316 aa)
LOC109520371CSD_1 domain-containing protein. (306 aa)
LOC109511132tRNA-binding domain-containing protein. (314 aa)
dis3lDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1054 aa)
nabp1Nucleic acid binding protein 1a. (169 aa)
RPS11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
ENSHCOP00000020772RPA1 related single stranded DNA binding protein. (314 aa)
Mrps17Mitochondrial ribosomal protein S17. (139 aa)
LOC109512337Cold shock domain containing C2, RNA binding a. (158 aa)
lig4DNA ligase. (910 aa)
psmc2Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
lig1DNA ligase. (902 aa)
dars2Aspartyl-tRNA synthetase 2, mitochondrial. (613 aa)
rpl8Ribosomal protein L8. (257 aa)
rpa3Replication protein A3. (127 aa)
pdcd11Programmed cell death 11. (1811 aa)
ENSHCOP00000025687Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family. (93 aa)
LOC109514992Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (161 aa)
LOC109510174DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (897 aa)
LOC109510163DIS3 exosome endoribonuclease and 3'-5' exoribonuclease. (561 aa)
exosc2Exosome component 2. (293 aa)
ENSHCOP00000027456DNA helicase; Belongs to the MCM family. (702 aa)
mcm4DNA helicase; Belongs to the MCM family. (939 aa)
ENSHCOP00000028059Uncharacterized protein. (127 aa)
mcm8Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (828 aa)
mrpl2Mitochondrial ribosomal protein L2. (302 aa)
ENSHCOP00000028329S1 motif domain-containing protein. (158 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (611 aa)
spout1SPOUT domain containing methyltransferase 1. (373 aa)
meiobMethionine sulfoxide reductase B1b. (439 aa)
LOC109509975Uncharacterized protein. (1827 aa)
nars1Asparaginyl-tRNA synthetase. (559 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (660 aa)
kars1Lysine--tRNA ligase. (598 aa)
mcm3DNA helicase; Belongs to the MCM family. (816 aa)
CSDE1Cold shock domain containing E1, RNA-binding. (905 aa)
zcchc17Zinc finger, CCHC domain containing 17. (245 aa)
eif2s1Eukaryotic translation initiation factor 2, subunit 1 alpha b. (315 aa)
LOC109507144Uncharacterized protein. (76 aa)
rps28Ribosomal protein S28. (69 aa)
mcm9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1028 aa)
rmi2RecQ mediated genome instability 2. (158 aa)
lin28aLin-28 homolog A. (209 aa)
yars1Tyrosine--tRNA ligase. (540 aa)
rpa2Replication protein A2. (314 aa)
CSDC2Cold shock domain containing C2. (155 aa)
polr3hPolymerase (RNA) III (DNA directed) polypeptide H. (213 aa)
LOC109512334Uncharacterized protein. (735 aa)
rngttPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (601 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (724 aa)
LOC109518782Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (176 aa)
EIF5AL1Eukaryotic translation initiation factor 5A. (155 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (189 aa)
ENSHCOP00000007765S1 motif domain-containing protein. (480 aa)
pot1Protection of telomeres 1 homolog. (842 aa)
ENSHCOP00000007916Uncharacterized protein. (273 aa)
lig3DNA ligase. (993 aa)
LOC109524545Tetratricopeptide repeat domain 14. (586 aa)
LOC109519125DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
mrps12Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (150 aa)
LOC109516819Lin-28 homolog B (C. elegans). (239 aa)
nars2Asparaginyl-tRNA synthetase 2, mitochondrial. (472 aa)
mcm10Minichromosome maintenance 10 replication initiation factor. (799 aa)
mcm2Minichromosome maintenance complex component 2; Belongs to the MCM family. (759 aa)
mcm6DNA helicase; Belongs to the MCM family. (853 aa)
LOC109517068Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (572 aa)
psmc4Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
ENSHCOP00000010133Aminoacyl tRNA synthetase complex interacting multifunctional protein 1b. (315 aa)
psmc6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
exosc3Exosome component 3. (246 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
LOC109517288Eukaryotic translation initiation factor 5A. (153 aa)
psmc3Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
LOC109529747Eukaryotic translation initiation factor 5A. (156 aa)
MCMDC2Minichromosome maintenance domain containing 2. (643 aa)
ENSHCOP00000012959Uncharacterized protein. (72 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1199 aa)
ybx1Y box binding protein 1. (303 aa)
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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