(12 nodes) RGS, subdomain 1/3 network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	axin1	Axin 1. (786 aa)
	LOC109521156	Regulator of G protein signaling 5b. (187 aa)
	LOC109524859	Regulator of G protein signaling 5a. (183 aa)
	LOC109511398	Uncharacterized protein. (887 aa)
	ENSHCOP00000015278	Regulator of G protein signaling 12b. (709 aa)
	AXIN2	Axin 2. (802 aa)
	LOC109515107	Axin 2 (conductin, axil). (831 aa)
	rgs14	Regulator of G protein signaling 14a. (591 aa)
	LOC109516921	Si:ch211-117l17.5. (188 aa)
	LOC109520319	Uncharacterized protein. (497 aa)
	LOC109521346	Regulator of G protein signaling 13. (192 aa)
	ENSHCOP00000018448	RGS domain-containing protein. (573 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AXIN2	LOC109511398	ENSHCOP00000010703	ENSHCOP00000006745	Axin 2.	Uncharacterized protein.	0.924
AXIN2	LOC109515107	ENSHCOP00000010703	ENSHCOP00000014262	Axin 2.	Axin 2 (conductin, axil).	0.902
ENSHCOP00000015278	ENSHCOP00000018448	ENSHCOP00000015278	ENSHCOP00000018448	Regulator of G protein signaling 12b.	RGS domain-containing protein.	0.442
ENSHCOP00000018448	ENSHCOP00000015278	ENSHCOP00000018448	ENSHCOP00000015278	RGS domain-containing protein.	Regulator of G protein signaling 12b.	0.442
ENSHCOP00000018448	LOC109520319	ENSHCOP00000018448	ENSHCOP00000019782	RGS domain-containing protein.	Uncharacterized protein.	0.442
ENSHCOP00000018448	LOC109521156	ENSHCOP00000018448	ENSHCOP00000003170	RGS domain-containing protein.	Regulator of G protein signaling 5b.	0.481
ENSHCOP00000018448	LOC109524859	ENSHCOP00000018448	ENSHCOP00000006232	RGS domain-containing protein.	Regulator of G protein signaling 5a.	0.513
ENSHCOP00000018448	rgs14	ENSHCOP00000018448	ENSHCOP00000025808	RGS domain-containing protein.	Regulator of G protein signaling 14a.	0.442
LOC109511398	AXIN2	ENSHCOP00000006745	ENSHCOP00000010703	Uncharacterized protein.	Axin 2.	0.924
LOC109511398	LOC109515107	ENSHCOP00000006745	ENSHCOP00000014262	Uncharacterized protein.	Axin 2 (conductin, axil).	0.924
LOC109515107	AXIN2	ENSHCOP00000014262	ENSHCOP00000010703	Axin 2 (conductin, axil).	Axin 2.	0.902
LOC109515107	LOC109511398	ENSHCOP00000014262	ENSHCOP00000006745	Axin 2 (conductin, axil).	Uncharacterized protein.	0.924
LOC109516921	LOC109521156	ENSHCOP00000021426	ENSHCOP00000003170	Si:ch211-117l17.5.	Regulator of G protein signaling 5b.	0.487
LOC109516921	LOC109524859	ENSHCOP00000021426	ENSHCOP00000006232	Si:ch211-117l17.5.	Regulator of G protein signaling 5a.	0.500
LOC109520319	ENSHCOP00000018448	ENSHCOP00000019782	ENSHCOP00000018448	Uncharacterized protein.	RGS domain-containing protein.	0.442
LOC109521156	ENSHCOP00000018448	ENSHCOP00000003170	ENSHCOP00000018448	Regulator of G protein signaling 5b.	RGS domain-containing protein.	0.481
LOC109521156	LOC109516921	ENSHCOP00000003170	ENSHCOP00000021426	Regulator of G protein signaling 5b.	Si:ch211-117l17.5.	0.487
LOC109521156	LOC109521346	ENSHCOP00000003170	ENSHCOP00000019099	Regulator of G protein signaling 5b.	Regulator of G protein signaling 13.	0.493
LOC109521156	LOC109524859	ENSHCOP00000003170	ENSHCOP00000006232	Regulator of G protein signaling 5b.	Regulator of G protein signaling 5a.	0.577
LOC109521346	LOC109521156	ENSHCOP00000019099	ENSHCOP00000003170	Regulator of G protein signaling 13.	Regulator of G protein signaling 5b.	0.493