(27 nodes) AAA ATPase, AAA+ lid domain network (Hippocampus comes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	yme1l1	YME1-like 1a. (711 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	LOC109531316	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (492 aa)
	LOC109507928	Si:ch1073-174d20.2. (719 aa)
	NSF	N-ethylmaleimide sensitive factor, vesicle fusing ATPase; Belongs to the AAA ATPase family. (699 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	LOC109531576	AAA domain-containing protein; Belongs to the AAA ATPase family. (658 aa)
	LOC109530164	N-ethylmaleimide-sensitive factor b. (775 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (715 aa)
	nvl	Nuclear VCP like. (848 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
	LOC109520521	YME1-like 1b. (719 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	afg3l2	AFG3-like AAA ATPase 2. (794 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	atad2b	ATPase family AAA domain containing 2B. (1317 aa)
	spg7	SPG7 matrix AAA peptidase subunit, paraplegin. (806 aa)
	atad1	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family. (395 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	LOC109525064	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family. (370 aa)
	SPATA5	Spermatogenesis associated 5. (887 aa)
	katna1	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (585 aa)
	atad2	ATPase family AAA domain containing 2. (886 aa)
	katnal2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (431 aa)
	Fignl1	Fidgetin-like 1; Belongs to the AAA ATPase family. (643 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fignl1	VPS4B	ENSHCOP00000004116	ENSHCOP00000002421	Fidgetin-like 1; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.423
LOC109507928	spg7	ENSHCOP00000022132	ENSHCOP00000003424	Si:ch1073-174d20.2.	SPG7 matrix AAA peptidase subunit, paraplegin.	0.737
LOC109525064	katnal2	ENSHCOP00000018461	ENSHCOP00000004835	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.425
LOC109525064	psmc6	ENSHCOP00000018461	ENSHCOP00000010200	ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.453
LOC109531316	psmc3	ENSHCOP00000021916	ENSHCOP00000011629	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.686
LOC109531316	psmc4	ENSHCOP00000021916	ENSHCOP00000009820	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.678
LOC109531316	psmc6	ENSHCOP00000021916	ENSHCOP00000010200	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.681
LOC109531576	spg7	ENSHCOP00000025508	ENSHCOP00000003424	AAA domain-containing protein; Belongs to the AAA ATPase family.	SPG7 matrix AAA peptidase subunit, paraplegin.	0.735
SPATA5	psmc1	ENSHCOP00000019051	ENSHCOP00000015971	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.746
SPATA5	psmc2	ENSHCOP00000019051	ENSHCOP00000023639	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.650
SPATA5	psmc3	ENSHCOP00000019051	ENSHCOP00000011629	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.729
SPATA5	psmc4	ENSHCOP00000019051	ENSHCOP00000009820	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.675
SPATA5	psmc5	ENSHCOP00000019051	ENSHCOP00000014246	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.683
SPATA5	psmc6	ENSHCOP00000019051	ENSHCOP00000010200	Spermatogenesis associated 5.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.614
VPS4B	Fignl1	ENSHCOP00000002421	ENSHCOP00000004116	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Fidgetin-like 1; Belongs to the AAA ATPase family.	0.423
VPS4B	katnal2	ENSHCOP00000002421	ENSHCOP00000004835	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.413
afg3l2	spg7	ENSHCOP00000010455	ENSHCOP00000003424	AFG3-like AAA ATPase 2.	SPG7 matrix AAA peptidase subunit, paraplegin.	0.739
atad1	katnal2	ENSHCOP00000003670	ENSHCOP00000004835	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.433
atad1	psmc3	ENSHCOP00000003670	ENSHCOP00000011629	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.408
atad1	psmc6	ENSHCOP00000003670	ENSHCOP00000010200	ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.467