29 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109514594	Si:dkey-240h12.4; Belongs to the protein kinase superfamily. (347 aa)
	LOC109517693	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (568 aa)
	appl2	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. (663 aa)
	LOC109514362	Death-associated protein kinase 2a; Belongs to the protein kinase superfamily. (475 aa)
	casp9	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (477 aa)
	LOC109525037	Uncharacterized protein. (394 aa)
	LOC109528393	Transmembrane protein 198b. (363 aa)
	LOC109518725	TNF superfamily member 10; Belongs to the tumor necrosis factor family. (290 aa)
	ENSHCOP00000009641	Unc-5 netrin receptor B. (911 aa)
	dapk2	Death-associated protein kinase 2b; Belongs to the protein kinase superfamily. (364 aa)
	LOC109517305	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (294 aa)
	cflar	Uncharacterized protein; Belongs to the peptidase C14A family. (480 aa)
	NEO1	Neogenin 1. (1180 aa)
	Neo1	Ig-like domain-containing protein. (108 aa)
	LOC109522446	DUF4203 domain-containing protein. (342 aa)
	LOC109523364	Transmembrane protein 198a. (392 aa)
	ENSHCOP00000016756	Uncharacterized protein. (469 aa)
	dapk3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (452 aa)
	tradd	Tnfrsf1a-associated via death domain. (288 aa)
	FADD	Fas associated via death domain. (188 aa)
	ENSHCOP00000023206	Uncharacterized protein. (265 aa)
	ENSHCOP00000025169	Protein kinase domain-containing protein. (362 aa)
	appl1	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. (709 aa)
	dcc	DCC netrin 1 receptor. (1445 aa)
	ENSHCOP00000026084	Tumor necrosis factor receptor superfamily, member a. (450 aa)
	ENSHCOP00000026762	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (190 aa)
	ripk1	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (677 aa)
	LOC109510598	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (501 aa)
	LOC109520533	Uncharacterized protein; Belongs to the peptidase C14A family. (492 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000009641	ENSHCOP00000016756	ENSHCOP00000009641	ENSHCOP00000016756	Unc-5 netrin receptor B.	Uncharacterized protein.	0.406
ENSHCOP00000009641	NEO1	ENSHCOP00000009641	ENSHCOP00000014708	Unc-5 netrin receptor B.	Neogenin 1.	0.464
ENSHCOP00000009641	Neo1	ENSHCOP00000009641	ENSHCOP00000014714	Unc-5 netrin receptor B.	Ig-like domain-containing protein.	0.464
ENSHCOP00000009641	dcc	ENSHCOP00000009641	ENSHCOP00000025889	Unc-5 netrin receptor B.	DCC netrin 1 receptor.	0.464
ENSHCOP00000016756	ENSHCOP00000009641	ENSHCOP00000016756	ENSHCOP00000009641	Uncharacterized protein.	Unc-5 netrin receptor B.	0.406
ENSHCOP00000016756	appl1	ENSHCOP00000016756	ENSHCOP00000025191	Uncharacterized protein.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	0.940
ENSHCOP00000016756	appl2	ENSHCOP00000016756	ENSHCOP00000004184	Uncharacterized protein.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	0.940
ENSHCOP00000016756	casp9	ENSHCOP00000016756	ENSHCOP00000004962	Uncharacterized protein.	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	0.583
ENSHCOP00000023206	ENSHCOP00000026084	ENSHCOP00000023206	ENSHCOP00000026084	Uncharacterized protein.	Tumor necrosis factor receptor superfamily, member a.	0.797
ENSHCOP00000023206	ENSHCOP00000026762	ENSHCOP00000023206	ENSHCOP00000026762	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.987
ENSHCOP00000023206	FADD	ENSHCOP00000023206	ENSHCOP00000020973	Uncharacterized protein.	Fas associated via death domain.	0.998
ENSHCOP00000023206	LOC109510598	ENSHCOP00000023206	ENSHCOP00000001096	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.487
ENSHCOP00000023206	LOC109517305	ENSHCOP00000023206	ENSHCOP00000011949	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.827
ENSHCOP00000023206	LOC109517693	ENSHCOP00000023206	ENSHCOP00000004161	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.487
ENSHCOP00000023206	LOC109520533	ENSHCOP00000023206	ENSHCOP00000001852	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.930
ENSHCOP00000023206	LOC109522446	ENSHCOP00000023206	ENSHCOP00000015976	Uncharacterized protein.	DUF4203 domain-containing protein.	0.465
ENSHCOP00000023206	LOC109523364	ENSHCOP00000023206	ENSHCOP00000016355	Uncharacterized protein.	Transmembrane protein 198a.	0.465
ENSHCOP00000023206	LOC109525037	ENSHCOP00000023206	ENSHCOP00000005056	Uncharacterized protein.	Uncharacterized protein.	0.654
ENSHCOP00000023206	LOC109528393	ENSHCOP00000023206	ENSHCOP00000006195	Uncharacterized protein.	Transmembrane protein 198b.	0.465
ENSHCOP00000023206	casp9	ENSHCOP00000023206	ENSHCOP00000004962	Uncharacterized protein.	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	0.669