STRINGSTRING
cops3 cops3 gtf2h1 gtf2h1 ercc6 ercc6 tcea1 tcea1 gtf2h4 gtf2h4 gps1 gps1 prpf19 prpf19 cdk7 cdk7 LOC109514850 LOC109514850 ENSHCOP00000024076 ENSHCOP00000024076 ppie ppie LOC109522892 LOC109522892 polr2a polr2a kxd1 kxd1 LOC109518943 LOC109518943 nrde2 nrde2 polr2l polr2l uba52 uba52 ENSHCOP00000020068 ENSHCOP00000020068 ENSHCOP00000018695 ENSHCOP00000018695 usp7 usp7 cul4a cul4a cops2 cops2 POLR2E POLR2E xpa xpa rps27a rps27a ZNF830 ZNF830 ddb1 ddb1 ercc8 ercc8 ccnh ccnh ercc3 ercc3 polr2k polr2k ercc2 ercc2 cul4b cul4b LOC109506821 LOC109506821 polr2j polr2j LOC109522402 LOC109522402 gtf2h3 gtf2h3 rbx1 rbx1 gtf2h5 gtf2h5 xab2 xab2 polr2b polr2b LOC109528246 LOC109528246 cops7a cops7a ubc ubc polr2i polr2i LOC109519125 LOC109519125 LOC109512841 LOC109512841 ubb ubb ENSHCOP00000007719 ENSHCOP00000007719 ENSHCOP00000007641 ENSHCOP00000007641 polr2g polr2g ppp1r42 ppp1r42 cops5 cops5 COPS6 COPS6 polr2c polr2c polr2d polr2d polr2f polr2f ENSHCOP00000004339 ENSHCOP00000004339 LOC109507180 LOC109507180 LOC109524429 LOC109524429 cops4 cops4 mnat1 mnat1 cops8 cops8 tceanc2 tceanc2 aqr aqr
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cops3COP9 signalosome subunit 3. (423 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (544 aa)
ercc6Excision repair cross-complementation group 6. (1377 aa)
tcea1Transcription elongation factor A (SII), 1. (309 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (441 aa)
gps1G protein pathway suppressor 1. (487 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
cdk7Cyclin-dependent kinase 7. (298 aa)
LOC109514850E1A binding protein p300 b. (2669 aa)
ENSHCOP00000024076Si:ch73-1a9.3. (58 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
LOC109522892RNA_pol_Rpb5_N domain-containing protein. (127 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
kxd1KxDL motif containing 1. (185 aa)
LOC109518943DNA-directed RNA polymerases I, II, and III subunit RPABC3. (150 aa)
nrde2NRDE-2, necessary for RNA interference, domain containing. (1031 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ENSHCOP00000020068Transcription elongation factor A (SII), 3. (331 aa)
ENSHCOP00000018695UV-stimulated scaffold protein A. (756 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1111 aa)
cul4aCullin 4A; Belongs to the cullin family. (749 aa)
cops2COP9 signalosome subunit 2. (443 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
xpaXeroderma pigmentosum, complementation group A. (279 aa)
rps27aRibosomal protein S27a. (156 aa)
ZNF830Zinc finger protein 830. (344 aa)
ddb1Damage-specific DNA binding protein 1. (1093 aa)
ercc8Excision repair cross-complementation group 8. (384 aa)
ccnhCyclin H; Belongs to the cyclin family. (320 aa)
ercc3Excision repair cross-complementation group 3. (782 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
ercc2Excision repair cross-complementation group 2. (591 aa)
cul4bCullin 4B; Belongs to the cullin family. (772 aa)
LOC109506821General transcription factor IIH subunit. (376 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (172 aa)
LOC109522402ISY1 splicing factor homolog. (340 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (299 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (181 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
xab2XPA binding protein 2. (846 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC109528246Transcription elongation factor A (SII), 2. (276 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
ubcUncharacterized protein. (989 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC109519125DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC109512841E1A binding protein p300 a. (2561 aa)
ubbUbiquitin B. (281 aa)
ENSHCOP00000007719Ubiquitin-like domain-containing protein. (106 aa)
ENSHCOP00000007641Uncharacterized protein. (208 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (189 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (330 aa)
cops5COP9 signalosome subunit 5. (333 aa)
COPS6COP9 signalosome subunit 6. (323 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (142 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSHCOP00000004339TFIIS central domain-containing protein. (236 aa)
LOC109507180Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)
LOC109524429High mobility group nucleosome binding domain 6. (90 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
mnat1MNAT1 component of CDK activating kinase. (289 aa)
cops8COP9 signalosome subunit 8. (191 aa)
tceanc2TFIIS N-terminal domain-containing protein. (208 aa)
aqrAquarius intron-binding spliceosomal factor. (1395 aa)
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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