39 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	atad2	ATPase family AAA domain containing 2. (886 aa)
	LOC109527342	CREB binding protein a. (2447 aa)
	KCTD15	Potassium channel tetramerization domain containing 15. (270 aa)
	LOC109517805	Uncharacterized protein. (871 aa)
	LOC109523154	Luteinizing hormone, beta polypeptide. (138 aa)
	LOC109523017	Homeobox protein. (291 aa)
	LOC109532549	CREB binding protein b. (1735 aa)
	tfap2b	Transcription factor AP-2 beta. (442 aa)
	LOC109512141	DEK_C domain-containing protein. (441 aa)
	LOC109514850	E1A binding protein p300 b. (2669 aa)
	LOC109522770	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b. (246 aa)
	wwox	WW domain containing oxidoreductase. (406 aa)
	kdm5b	Lysine (K)-specific demethylase 5Ba. (1415 aa)
	myc	Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (433 aa)
	tfap2e	Transcription factor AP-2 epsilon. (442 aa)
	LOC109529059	Nucleophosmin 1b. (295 aa)
	atad2b	ATPase family AAA domain containing 2B. (1317 aa)
	tfap2a	Transcription factor AP-2 alpha. (442 aa)
	LOC109520279	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	LOC109532526	Uncharacterized protein. (1579 aa)
	ENSHCOP00000006772	Uncharacterized protein. (615 aa)
	pitx2	Homeobox protein. (308 aa)
	LOC109509139	Uncharacterized protein. (138 aa)
	LOC109526864	Lysine (K)-specific demethylase 5Bb. (1449 aa)
	LOC109512841	E1A binding protein p300 a. (2561 aa)
	tfap2d	Transcription factor AP-2 delta (activating enhancer binding protein 2 delta). (457 aa)
	pitx1	Homeobox protein. (328 aa)
	LOC109525330	BTB_2 domain-containing protein. (248 aa)
	sumo1	Small ubiquitin-related modifier. (101 aa)
	mybl2	V-myb avian myeloblastosis viral oncogene homolog-like 2b. (632 aa)
	LOC109521557	Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma). (426 aa)
	LOC109508952	Nucleophosmin 1a. (265 aa)
	esr1	Estrogen receptor 1. (651 aa)
	yeats4	YEATS domain containing 4. (226 aa)
	LOC109521513	BHLH domain-containing protein. (327 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	nop2	NOP2 nucleolar protein homolog (yeast); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (759 aa)
	cited1	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (168 aa)
	KCTD1	Potassium channel tetramerization domain containing 1. (344 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000006772	LOC109512141	ENSHCOP00000006772	ENSHCOP00000022674	Uncharacterized protein.	DEK_C domain-containing protein.	0.407
ENSHCOP00000006772	LOC109512841	ENSHCOP00000006772	ENSHCOP00000007909	Uncharacterized protein.	E1A binding protein p300 a.	0.854
ENSHCOP00000006772	LOC109514850	ENSHCOP00000006772	ENSHCOP00000024673	Uncharacterized protein.	E1A binding protein p300 b.	0.854
ENSHCOP00000006772	LOC109517805	ENSHCOP00000006772	ENSHCOP00000018269	Uncharacterized protein.	Uncharacterized protein.	0.409
ENSHCOP00000006772	LOC109520279	ENSHCOP00000006772	ENSHCOP00000005285	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.466
ENSHCOP00000006772	LOC109522770	ENSHCOP00000006772	ENSHCOP00000025472	Uncharacterized protein.	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b.	0.820
ENSHCOP00000006772	LOC109532549	ENSHCOP00000006772	ENSHCOP00000021630	Uncharacterized protein.	CREB binding protein b.	0.925
ENSHCOP00000006772	cited1	ENSHCOP00000006772	ENSHCOP00000015903	Uncharacterized protein.	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1.	0.722
ENSHCOP00000006772	esr1	ENSHCOP00000006772	ENSHCOP00000011551	Uncharacterized protein.	Estrogen receptor 1.	0.636
ENSHCOP00000006772	mybl2	ENSHCOP00000006772	ENSHCOP00000010098	Uncharacterized protein.	V-myb avian myeloblastosis viral oncogene homolog-like 2b.	0.409
ENSHCOP00000006772	myc	ENSHCOP00000006772	ENSHCOP00000000380	Uncharacterized protein.	Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.	0.518
ENSHCOP00000006772	sumo1	ENSHCOP00000006772	ENSHCOP00000008810	Uncharacterized protein.	Small ubiquitin-related modifier.	0.877
ENSHCOP00000006772	tfap2d	ENSHCOP00000006772	ENSHCOP00000008090	Uncharacterized protein.	Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).	0.482
ENSHCOP00000006772	ube2i	ENSHCOP00000006772	ENSHCOP00000012367	Uncharacterized protein.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.466
KCTD1	LOC109520279	ENSHCOP00000017154	ENSHCOP00000005285	Potassium channel tetramerization domain containing 1.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.678
KCTD1	LOC109521557	ENSHCOP00000017154	ENSHCOP00000011042	Potassium channel tetramerization domain containing 1.	Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma).	0.594
KCTD1	tfap2a	ENSHCOP00000017154	ENSHCOP00000003946	Potassium channel tetramerization domain containing 1.	Transcription factor AP-2 alpha.	0.594
KCTD1	tfap2b	ENSHCOP00000017154	ENSHCOP00000022518	Potassium channel tetramerization domain containing 1.	Transcription factor AP-2 beta.	0.594
KCTD1	tfap2d	ENSHCOP00000017154	ENSHCOP00000008090	Potassium channel tetramerization domain containing 1.	Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).	0.654
KCTD1	tfap2e	ENSHCOP00000017154	ENSHCOP00000002631	Potassium channel tetramerization domain containing 1.	Transcription factor AP-2 epsilon.	0.594