10 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAP1GDS1	Rap1 GTPase-GDP dissociation stimulator 1. (560 aa)
	mfn2	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (758 aa)
	LOC109523232	Si:dkey-191g9.5. (549 aa)
	LOC109529633	Trafficking protein, kinesin binding 1a. (706 aa)
	rhot2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (618 aa)
	LOC109527449	Si:dkey-28e7.3. (790 aa)
	Myo19	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (190 aa)
	LOC109519204	Uncharacterized protein. (547 aa)
	ENSHCOP00000023799	Trafficking protein, kinesin binding 2. (606 aa)
	mfn1	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (758 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000023799	LOC109519204	ENSHCOP00000023799	ENSHCOP00000028069	Trafficking protein, kinesin binding 2.	Uncharacterized protein.	0.515
ENSHCOP00000023799	LOC109527449	ENSHCOP00000023799	ENSHCOP00000025395	Trafficking protein, kinesin binding 2.	Si:dkey-28e7.3.	0.514
ENSHCOP00000023799	LOC109529633	ENSHCOP00000023799	ENSHCOP00000007521	Trafficking protein, kinesin binding 2.	Trafficking protein, kinesin binding 1a.	0.501
ENSHCOP00000023799	Myo19	ENSHCOP00000023799	ENSHCOP00000027880	Trafficking protein, kinesin binding 2.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.568
ENSHCOP00000023799	rhot2	ENSHCOP00000023799	ENSHCOP00000025456	Trafficking protein, kinesin binding 2.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.806
LOC109519204	ENSHCOP00000023799	ENSHCOP00000028069	ENSHCOP00000023799	Uncharacterized protein.	Trafficking protein, kinesin binding 2.	0.515
LOC109519204	rhot2	ENSHCOP00000028069	ENSHCOP00000025456	Uncharacterized protein.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.717
LOC109523232	rhot2	ENSHCOP00000021835	ENSHCOP00000025456	Si:dkey-191g9.5.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.504
LOC109527449	ENSHCOP00000023799	ENSHCOP00000025395	ENSHCOP00000023799	Si:dkey-28e7.3.	Trafficking protein, kinesin binding 2.	0.514
LOC109527449	rhot2	ENSHCOP00000025395	ENSHCOP00000025456	Si:dkey-28e7.3.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.589
LOC109529633	ENSHCOP00000023799	ENSHCOP00000007521	ENSHCOP00000023799	Trafficking protein, kinesin binding 1a.	Trafficking protein, kinesin binding 2.	0.501
LOC109529633	rhot2	ENSHCOP00000007521	ENSHCOP00000025456	Trafficking protein, kinesin binding 1a.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.717
Myo19	ENSHCOP00000023799	ENSHCOP00000027880	ENSHCOP00000023799	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Trafficking protein, kinesin binding 2.	0.568
Myo19	rhot2	ENSHCOP00000027880	ENSHCOP00000025456	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.667
RAP1GDS1	rhot2	ENSHCOP00000021723	ENSHCOP00000025456	Rap1 GTPase-GDP dissociation stimulator 1.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.504
mfn1	mfn2	ENSHCOP00000015257	ENSHCOP00000024121	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.961
mfn1	rhot2	ENSHCOP00000015257	ENSHCOP00000025456	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.631
mfn2	mfn1	ENSHCOP00000024121	ENSHCOP00000015257	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.961
mfn2	rhot2	ENSHCOP00000024121	ENSHCOP00000025456	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.670
rhot2	ENSHCOP00000023799	ENSHCOP00000025456	ENSHCOP00000023799	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Trafficking protein, kinesin binding 2.	0.806