17 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rasl11b	RAS-like, family 11, member B. (240 aa)
	mfhas1	Malignant fibrous histiocytoma amplified sequence 1. (1096 aa)
	ift27	Intraflagellar transport 27 homolog (Chlamydomonas). (188 aa)
	ENSHCOP00000021752	Uncharacterized protein. (96 aa)
	rab24	RAB24, member RAS oncogene family. (208 aa)
	ift22	Intraflagellar transport 22 homolog (Chlamydomonas). (186 aa)
	RAB22A	RAB22A, member RAS oncogene family. (237 aa)
	rrad	Ras-related associated with diabetes. (311 aa)
	ENSHCOP00000004244	Uncharacterized protein. (54 aa)
	LOC109532518	Uncharacterized protein. (276 aa)
	ENSHCOP00000007707	Uncharacterized protein. (76 aa)
	cplane2	Ciliogenesis and planar polarity effector 2. (240 aa)
	LOC109527036	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (609 aa)
	ENSHCOP00000006956	Uncharacterized protein. (122 aa)
	LOC109509334	Uncharacterized protein. (92 aa)
	LOC109511185	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (581 aa)
	lrrk1	Leucine-rich repeat kinase 1. (1961 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000021752	LOC109509334	ENSHCOP00000021752	ENSHCOP00000016084	Uncharacterized protein.	Uncharacterized protein.	0.411
LOC109509334	ENSHCOP00000021752	ENSHCOP00000016084	ENSHCOP00000021752	Uncharacterized protein.	Uncharacterized protein.	0.411
LOC109511185	LOC109527036	ENSHCOP00000026493	ENSHCOP00000020215	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.901
LOC109527036	LOC109511185	ENSHCOP00000020215	ENSHCOP00000026493	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.901
cplane2	ift22	ENSHCOP00000027862	ENSHCOP00000013569	Ciliogenesis and planar polarity effector 2.	Intraflagellar transport 22 homolog (Chlamydomonas).	0.640
cplane2	ift27	ENSHCOP00000027862	ENSHCOP00000007802	Ciliogenesis and planar polarity effector 2.	Intraflagellar transport 27 homolog (Chlamydomonas).	0.659
ift22	cplane2	ENSHCOP00000013569	ENSHCOP00000027862	Intraflagellar transport 22 homolog (Chlamydomonas).	Ciliogenesis and planar polarity effector 2.	0.640
ift22	ift27	ENSHCOP00000013569	ENSHCOP00000007802	Intraflagellar transport 22 homolog (Chlamydomonas).	Intraflagellar transport 27 homolog (Chlamydomonas).	0.939
ift27	cplane2	ENSHCOP00000007802	ENSHCOP00000027862	Intraflagellar transport 27 homolog (Chlamydomonas).	Ciliogenesis and planar polarity effector 2.	0.659
ift27	ift22	ENSHCOP00000007802	ENSHCOP00000013569	Intraflagellar transport 27 homolog (Chlamydomonas).	Intraflagellar transport 22 homolog (Chlamydomonas).	0.939