22 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109510414	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (551 aa)
	fzd3	Frizzled class receptor 3a; Belongs to the G-protein coupled receptor Fz/Smo family. (689 aa)
	sfrp1	Secreted frizzled-related protein 1a. (310 aa)
	sfrp2	Secreted frizzled-related protein 2. (299 aa)
	Fzd2	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family. (548 aa)
	LOC109518923	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (590 aa)
	fzd9	Frizzled class receptor 9b; Belongs to the G-protein coupled receptor Fz/Smo family. (585 aa)
	Fzd10	Frizzled class receptor 10; Belongs to the G-protein coupled receptor Fz/Smo family. (567 aa)
	fzd6	Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family. (678 aa)
	LOC109525531	Uncharacterized protein. (324 aa)
	fzd4	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (531 aa)
	corin	Corin, serine peptidase. (937 aa)
	sfrp5	Secreted frizzled-related protein 5. (321 aa)
	LOC109528579	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (704 aa)
	FZD7	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family. (525 aa)
	fzd8	Frizzled class receptor 8a; Belongs to the G-protein coupled receptor Fz/Smo family. (583 aa)
	frzb	Frizzled related protein. (314 aa)
	CPZ	Carboxypeptidase Z. (673 aa)
	LOC109529816	Sizzled. (281 aa)
	LOC109512258	Uncharacterized protein. (652 aa)
	smo	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (808 aa)
	LOC109527363	Carboxypeptidase Z. (599 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FZD7	LOC109525531	ENSHCOP00000015021	ENSHCOP00000011682	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.685
FZD7	fzd4	ENSHCOP00000015021	ENSHCOP00000012037	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.411
FZD7	sfrp1	ENSHCOP00000015021	ENSHCOP00000004959	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 1a.	0.691
FZD7	sfrp2	ENSHCOP00000015021	ENSHCOP00000005098	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 2.	0.685
FZD7	sfrp5	ENSHCOP00000015021	ENSHCOP00000014671	Frizzled class receptor 7; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 5.	0.691
Fzd10	LOC109525531	ENSHCOP00000011441	ENSHCOP00000011682	Frizzled class receptor 10; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.650
Fzd10	sfrp1	ENSHCOP00000011441	ENSHCOP00000004959	Frizzled class receptor 10; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 1a.	0.672
Fzd10	sfrp2	ENSHCOP00000011441	ENSHCOP00000005098	Frizzled class receptor 10; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 2.	0.650
Fzd10	sfrp5	ENSHCOP00000011441	ENSHCOP00000014671	Frizzled class receptor 10; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 5.	0.672
Fzd2	LOC109525531	ENSHCOP00000006032	ENSHCOP00000011682	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.685
Fzd2	fzd4	ENSHCOP00000006032	ENSHCOP00000012037	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.409
Fzd2	sfrp1	ENSHCOP00000006032	ENSHCOP00000004959	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 1a.	0.712
Fzd2	sfrp2	ENSHCOP00000006032	ENSHCOP00000005098	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 2.	0.685
Fzd2	sfrp5	ENSHCOP00000006032	ENSHCOP00000014671	Frizzled class receptor 2; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 5.	0.715
LOC109510414	LOC109525531	ENSHCOP00000001656	ENSHCOP00000011682	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.685
LOC109510414	fzd4	ENSHCOP00000001656	ENSHCOP00000012037	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.416
LOC109510414	sfrp1	ENSHCOP00000001656	ENSHCOP00000004959	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 1a.	0.691
LOC109510414	sfrp2	ENSHCOP00000001656	ENSHCOP00000005098	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 2.	0.685
LOC109510414	sfrp5	ENSHCOP00000001656	ENSHCOP00000014671	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Secreted frizzled-related protein 5.	0.691
LOC109518923	LOC109525531	ENSHCOP00000008742	ENSHCOP00000011682	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.675