92 items (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	src	Tyrosine-protein kinase. (543 aa)
	igf1r	Tyrosine-protein kinase receptor. (1409 aa)
	fer	Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily. (826 aa)
	LOC109513808	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (476 aa)
	LOC109525057	Transcription factor 7 like 1b. (577 aa)
	LOC109528419	Ras homolog gene family, member Aa. (193 aa)
	LOC109521500	Snail family zinc finger 1a. (253 aa)
	LOC109531819	Tyrosine-protein kinase. (547 aa)
	ctnna1	Catenin (cadherin-associated protein), alpha 1. (907 aa)
	LOC109522387	Uncharacterized protein. (193 aa)
	LOC109511764	Uncharacterized protein. (262 aa)
	iqgap1	IQ motif containing GTPase activating protein 1. (1652 aa)
	LOC109520242	Uncharacterized protein. (387 aa)
	CDC42	Cell division cycle 42. (191 aa)
	TGFBR2	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (562 aa)
	LOC109516373	PVR cell adhesion molecule related 2 like. (395 aa)
	LOC109514326	Tight junction protein 1a; Belongs to the MAGUK family. (1685 aa)
	LOC109530382	Uncharacterized protein. (1807 aa)
	LOC109513573	Tyrosine-protein kinase. (538 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (783 aa)
	LOC109511299	Uncharacterized protein. (192 aa)
	was	Uncharacterized protein. (505 aa)
	CTNND1	Catenin delta 1. (917 aa)
	LOC109529494	Par-3 family cell polarity regulator alpha, b. (1394 aa)
	LOC109531669	Si:ch73-22o12.1. (509 aa)
	wasf1	WASP family member 1. (486 aa)
	ENSHCOP00000010118	HMG box domain-containing protein. (228 aa)
	LOC109517597	Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
	LOC109530291	Receptor protein-tyrosine kinase. (1183 aa)
	LOC109530275	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (508 aa)
	ENSHCOP00000010958	WASP like actin nucleation promoting factor b. (505 aa)
	RAC1	Rac family small GTPase 1. (192 aa)
	LOC109514865	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (394 aa)
	LOC109532208	Uncharacterized protein. (266 aa)
	smad3	Mothers against decapentaplegic homolog. (425 aa)
	csnk2a2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (349 aa)
	tcf7l2	Transcription factor 7 like 2. (614 aa)
	met	MET proto-oncogene, receptor tyrosine kinase. (1423 aa)
	actn4	Actinin, alpha 4. (899 aa)
	egfr	Receptor protein-tyrosine kinase. (1201 aa)
	ptpn6	Protein tyrosine phosphatase non-receptor type 6. (583 aa)
	ENSHCOP00000014362	Uncharacterized protein. (77 aa)
	ctnna2	Catenin (cadherin-associated protein), alpha 2. (935 aa)
	LOC109521989	Synovial sarcoma, X breakpoint 2 interacting protein b. (399 aa)
	wasf2	WASP family member 2. (398 aa)
	LOC109528056	Uncharacterized protein. (191 aa)
	LOC109514703	Mothers against decapentaplegic homolog. (503 aa)
	SNAI2	Snail family transcriptional repressor 2. (249 aa)
	LOC109531368	Uncharacterized protein. (193 aa)
	LOC109508177	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (333 aa)
	Lmo7	Calponin-homology (CH) domain-containing protein. (191 aa)
	LOC109528254	Snail family zinc finger 1b. (262 aa)
	LOC109517462	Tyrosine-protein kinase. (545 aa)
	LOC109527933	HMG box domain-containing protein. (512 aa)
	LOC109517921	WH2 domain-containing protein. (459 aa)
	LOC109527342	CREB binding protein a. (2447 aa)
	LOC109507385	Tyrosine-protein kinase receptor. (1359 aa)
	LOC109511892	Uncharacterized protein. (417 aa)
	LOC109519737	LIM zinc-binding domain-containing protein. (946 aa)
	lef1	Lymphoid enhancer-binding factor 1. (380 aa)
	LOC109513166	Tyrosine-protein kinase receptor. (1329 aa)
	LOC109514370	Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (348 aa)
	LOC109512561	Nectin cell adhesion molecule 3b. (551 aa)
	csnk2b	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	LOC109523134	Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins. (882 aa)
	LOC109532545	BAI1-associated protein 2a. (553 aa)
	LOC109515640	Transcription factor 7. (479 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (368 aa)
	LOC109532549	CREB binding protein b. (1735 aa)
	ptprb	Uncharacterized protein. (2302 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	LOC109526882	Tyrosine-protein phosphatase non-receptor type. (406 aa)
	ENSHCOP00000022786	Uncharacterized protein. (460 aa)
	LOC109514211	Mothers against decapentaplegic homolog. (510 aa)
	LOC109513623	Uncharacterized protein. (768 aa)
	ENSHCOP00000023562	Uncharacterized protein. (272 aa)
	nectin1	Nectin cell adhesion molecule 1b. (537 aa)
	nlk	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (533 aa)
	ENSHCOP00000024166	Nectin cell adhesion molecule 4b. (412 aa)
	YES1	Tyrosine-protein kinase. (545 aa)
	LOC109524066	Synovial sarcoma, X breakpoint 2 interacting protein a. (535 aa)
	LOC109527330	Catenin (cadherin-associated protein), delta 1. (818 aa)
	LOC109527307	Si:ch211-286b5.4. (434 aa)
	vcl	Vinculin b. (1066 aa)
	erbb2	Receptor protein-tyrosine kinase. (1296 aa)
	LOC109515379	Uncharacterized protein. (191 aa)
	LOC109529292	Rac family small GTPase 3b. (124 aa)
	wasf3	WASP family member 3b. (490 aa)
	LOC109515160	Uncharacterized protein. (192 aa)
	LOC109529256	Protein kinase domain-containing protein. (503 aa)
	LOC109521595	Uncharacterized protein. (191 aa)
	LOC109515290	Zgc:158689. (678 aa)

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	CTNND1	ENSHCOP00000005967	ENSHCOP00000008073	Cell division cycle 42.	Catenin delta 1.	0.928
CDC42	ENSHCOP00000010958	ENSHCOP00000005967	ENSHCOP00000010958	Cell division cycle 42.	WASP like actin nucleation promoting factor b.	0.984
CDC42	LOC109511299	ENSHCOP00000005967	ENSHCOP00000007629	Cell division cycle 42.	Uncharacterized protein.	0.575
CDC42	LOC109511764	ENSHCOP00000005967	ENSHCOP00000005171	Cell division cycle 42.	Uncharacterized protein.	0.490
CDC42	LOC109513573	ENSHCOP00000005967	ENSHCOP00000006859	Cell division cycle 42.	Tyrosine-protein kinase.	0.506
CDC42	LOC109515160	ENSHCOP00000005967	ENSHCOP00000026894	Cell division cycle 42.	Uncharacterized protein.	0.575
CDC42	LOC109515290	ENSHCOP00000005967	ENSHCOP00000028396	Cell division cycle 42.	Zgc:158689.	0.419
CDC42	LOC109517462	ENSHCOP00000005967	ENSHCOP00000016818	Cell division cycle 42.	Tyrosine-protein kinase.	0.466
CDC42	LOC109517921	ENSHCOP00000005967	ENSHCOP00000017140	Cell division cycle 42.	WH2 domain-containing protein.	0.470
CDC42	LOC109520242	ENSHCOP00000005967	ENSHCOP00000005557	Cell division cycle 42.	Uncharacterized protein.	0.428
CDC42	LOC109522387	ENSHCOP00000005967	ENSHCOP00000004882	Cell division cycle 42.	Uncharacterized protein.	0.490
CDC42	LOC109523134	ENSHCOP00000005967	ENSHCOP00000021139	Cell division cycle 42.	Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins.	0.581
CDC42	LOC109527330	ENSHCOP00000005967	ENSHCOP00000024618	Cell division cycle 42.	Catenin (cadherin-associated protein), delta 1.	0.928
CDC42	LOC109528419	ENSHCOP00000005967	ENSHCOP00000001291	Cell division cycle 42.	Ras homolog gene family, member Aa.	0.491
CDC42	LOC109529292	ENSHCOP00000005967	ENSHCOP00000026731	Cell division cycle 42.	Rac family small GTPase 3b.	0.579
CDC42	LOC109529494	ENSHCOP00000005967	ENSHCOP00000009116	Cell division cycle 42.	Par-3 family cell polarity regulator alpha, b.	0.462
CDC42	LOC109530291	ENSHCOP00000005967	ENSHCOP00000010454	Cell division cycle 42.	Receptor protein-tyrosine kinase.	0.439
CDC42	LOC109531368	ENSHCOP00000005967	ENSHCOP00000015776	Cell division cycle 42.	Uncharacterized protein.	0.491
CDC42	LOC109531819	ENSHCOP00000005967	ENSHCOP00000004593	Cell division cycle 42.	Tyrosine-protein kinase.	0.451
CDC42	LOC109532208	ENSHCOP00000005967	ENSHCOP00000011846	Cell division cycle 42.	Uncharacterized protein.	0.920