(11 nodes) Mixed, incl. Mitochondrial electron transport, NADH to ubiquinone, and DNA-templated transcriptional start site selection network (Brassica oleracea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3AVD9	Uncharacterized protein. (58 aa)
	A0A0D3AWR7	L51_S25_CI-B8 domain-containing protein. (134 aa)
	A0A0D3B0B3	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (486 aa)
	A0A0D3BEL0	Uncharacterized protein. (150 aa)
	A0A0D3CN45	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (159 aa)
	A0A0D3CN48	zf-CHCC domain-containing protein. (112 aa)
	A0A0D3D1Q4	Uncharacterized protein. (222 aa)
	A0A0D3D8P5	CCHC-type domain-containing protein. (709 aa)
	A0A0D3DHQ2	Uncharacterized protein; Belongs to the complex I LYR family. (117 aa)
	A0A0D3E3M6	Epimerase domain-containing protein. (402 aa)
	A0A0D3EE99	CHCH domain-containing protein. (106 aa)

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3AVD9	A0A0D3AWR7	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.994
A0A0D3AVD9	A0A0D3B0B3	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.992
A0A0D3AVD9	A0A0D3BEL0	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0D3AVD9	A0A0D3CN45	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.994
A0A0D3AVD9	A0A0D3CN48	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.998
A0A0D3AVD9	A0A0D3D1Q4	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A0D3AVD9	A0A0D3D8P5	Uncharacterized protein.	CCHC-type domain-containing protein.	0.986
A0A0D3AVD9	A0A0D3DHQ2	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.994
A0A0D3AVD9	A0A0D3E3M6	Uncharacterized protein.	Epimerase domain-containing protein.	0.997
A0A0D3AVD9	A0A0D3EE99	Uncharacterized protein.	CHCH domain-containing protein.	0.996
A0A0D3AWR7	A0A0D3AVD9	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.994
A0A0D3AWR7	A0A0D3B0B3	L51_S25_CI-B8 domain-containing protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.975
A0A0D3AWR7	A0A0D3BEL0	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.995
A0A0D3AWR7	A0A0D3CN45	L51_S25_CI-B8 domain-containing protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.995
A0A0D3AWR7	A0A0D3CN48	L51_S25_CI-B8 domain-containing protein.	zf-CHCC domain-containing protein.	0.998
A0A0D3AWR7	A0A0D3D1Q4	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.994
A0A0D3AWR7	A0A0D3D8P5	L51_S25_CI-B8 domain-containing protein.	CCHC-type domain-containing protein.	0.993
A0A0D3AWR7	A0A0D3DHQ2	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.992
A0A0D3AWR7	A0A0D3E3M6	L51_S25_CI-B8 domain-containing protein.	Epimerase domain-containing protein.	0.997
A0A0D3AWR7	A0A0D3EE99	L51_S25_CI-B8 domain-containing protein.	CHCH domain-containing protein.	0.997