15 items (Brassica oleracea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3ADS6	Uncharacterized protein. (303 aa)
	A0A0D3AV03	CBFD_NFYB_HMF domain-containing protein. (185 aa)
	A0A0D3B5R8	CBFD_NFYB_HMF domain-containing protein. (105 aa)
	A0A0D3BBK2	CBFD_NFYB_HMF domain-containing protein. (186 aa)
	A0A0D3BN18	Uncharacterized protein. (232 aa)
	A0A0D3BQQ9	CBFD_NFYB_HMF domain-containing protein. (143 aa)
	A0A0D3BS17	Uncharacterized protein. (195 aa)
	A0A0D3C8M0	CBFD_NFYB_HMF domain-containing protein. (277 aa)
	A0A0D3CR56	CBFD_NFYB_HMF domain-containing protein. (180 aa)
	A0A0D3CSB3	Uncharacterized protein. (235 aa)
	A0A0D3D078	RNase H domain-containing protein. (509 aa)
	A0A0D3D079	Uncharacterized protein. (343 aa)
	A0A0D3DNJ2	CBFD_NFYB_HMF domain-containing protein. (349 aa)
	A0A0D3DSR1	CBFD_NFYB_HMF domain-containing protein. (181 aa)
	A0A0D3E7A5	CBFD_NFYB_HMF domain-containing protein. (207 aa)

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ADS6	A0A0D3AV03	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.862
A0A0D3ADS6	A0A0D3B5R8	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.842
A0A0D3ADS6	A0A0D3BBK2	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.746
A0A0D3ADS6	A0A0D3BQQ9	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.877
A0A0D3ADS6	A0A0D3BS17	Uncharacterized protein.	Uncharacterized protein.	0.435
A0A0D3ADS6	A0A0D3C8M0	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.863
A0A0D3ADS6	A0A0D3CR56	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.761
A0A0D3ADS6	A0A0D3D078	Uncharacterized protein.	RNase H domain-containing protein.	0.502
A0A0D3ADS6	A0A0D3D079	Uncharacterized protein.	Uncharacterized protein.	0.496
A0A0D3ADS6	A0A0D3DNJ2	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.832
A0A0D3ADS6	A0A0D3DSR1	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.888
A0A0D3ADS6	A0A0D3E7A5	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.868
A0A0D3AV03	A0A0D3ADS6	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.862
A0A0D3AV03	A0A0D3BN18	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.857
A0A0D3AV03	A0A0D3BS17	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.870
A0A0D3AV03	A0A0D3C8M0	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.964
A0A0D3AV03	A0A0D3CR56	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.965
A0A0D3AV03	A0A0D3CSB3	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.858
A0A0D3AV03	A0A0D3D078	CBFD_NFYB_HMF domain-containing protein.	RNase H domain-containing protein.	0.830
A0A0D3AV03	A0A0D3D079	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.831