7 items (Brassica oleracea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3DIY5	General transcription factor IIH subunit. (422 aa)
	A0A0D3DQ66	Uncharacterized protein. (261 aa)
	A0A0D3CNV5	BSD domain-containing protein. (299 aa)
	A0A0D3CB70	Uncharacterized protein. (300 aa)
	A0A0D3C9M7	Uncharacterized protein. (70 aa)
	A0A0D3AP91	Uncharacterized protein. (592 aa)
	A0A0D3A7F5	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (505 aa)

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3A7F5	A0A0D3AP91	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.994
A0A0D3A7F5	A0A0D3C9M7	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.995
A0A0D3A7F5	A0A0D3CB70	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.994
A0A0D3A7F5	A0A0D3CNV5	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	BSD domain-containing protein.	0.994
A0A0D3A7F5	A0A0D3DIY5	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	General transcription factor IIH subunit.	0.996
A0A0D3A7F5	A0A0D3DQ66	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.994
A0A0D3AP91	A0A0D3A7F5	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.994
A0A0D3AP91	A0A0D3C9M7	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0D3AP91	A0A0D3CB70	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0D3AP91	A0A0D3DIY5	Uncharacterized protein.	General transcription factor IIH subunit.	0.994
A0A0D3AP91	A0A0D3DQ66	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0D3C9M7	A0A0D3A7F5	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.995
A0A0D3C9M7	A0A0D3AP91	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0D3C9M7	A0A0D3CB70	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A0D3C9M7	A0A0D3CNV5	Uncharacterized protein.	BSD domain-containing protein.	0.990
A0A0D3C9M7	A0A0D3DIY5	Uncharacterized protein.	General transcription factor IIH subunit.	0.994
A0A0D3C9M7	A0A0D3DQ66	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A0D3CB70	A0A0D3A7F5	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.994
A0A0D3CB70	A0A0D3AP91	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0D3CB70	A0A0D3C9M7	Uncharacterized protein.	Uncharacterized protein.	0.993