43 items (Brassica oleracea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3CC98	CBFD_NFYB_HMF domain-containing protein. (320 aa)
	A0A0D3DSR1	CBFD_NFYB_HMF domain-containing protein. (181 aa)
	A0A0D3E218	SAP domain-containing protein. (427 aa)
	A0A0D3E2U9	CBFD_NFYB_HMF domain-containing protein. (208 aa)
	A0A0D3E4M7	J domain-containing protein. (748 aa)
	A0A0D3E7A5	CBFD_NFYB_HMF domain-containing protein. (207 aa)
	A0A0D3EG67	Uncharacterized protein. (845 aa)
	A0A0D3EGQ2	J domain-containing protein. (290 aa)
	A0A0D3EHD0	Uncharacterized protein. (311 aa)
	A0A0D3EHQ9	Uncharacterized protein. (1339 aa)
	A0A0D3C8M4	CBFD_NFYB_HMF domain-containing protein. (132 aa)
	A0A0D3CHB7	SWIM-type domain-containing protein. (841 aa)
	A0A0D3CJR4	CBFD_NFYB_HMF domain-containing protein. (164 aa)
	A0A0D3CR56	CBFD_NFYB_HMF domain-containing protein. (180 aa)
	A0A0D3D7N6	CBFD_NFYB_HMF domain-containing protein. (774 aa)
	A0A0D3D9X0	CBFD_NFYB_HMF domain-containing protein. (134 aa)
	A0A0D3DBI7	Uncharacterized protein. (152 aa)
	A0A0D3DDV8	GATA-type domain-containing protein. (274 aa)
	A0A0D3DNJ2	CBFD_NFYB_HMF domain-containing protein. (349 aa)
	A0A0D3DQV8	CBFD_NFYB_HMF domain-containing protein. (229 aa)
	A0A0D3DRF4	CBFD_NFYB_HMF domain-containing protein. (265 aa)
	A0A0D3DS25	GATA-type domain-containing protein. (290 aa)
	A0A0D3ABN1	SWIM-type domain-containing protein. (825 aa)
	A0A0D3AD93	CBFD_NFYB_HMF domain-containing protein. (157 aa)
	A0A0D3AHU2	Uncharacterized protein. (712 aa)
	A0A0D3AV03	CBFD_NFYB_HMF domain-containing protein. (185 aa)
	A0A0D3AVA2	J domain-containing protein. (317 aa)
	A0A0D3AWJ8	Uncharacterized protein. (77 aa)
	A0A0D3AWK7	Uncharacterized protein. (173 aa)
	A0A0D3AYP1	J domain-containing protein. (368 aa)
	A0A0D3B5C3	CBFD_NFYB_HMF domain-containing protein. (220 aa)
	A0A0D3B5R8	CBFD_NFYB_HMF domain-containing protein. (105 aa)
	A0A0D3B755	CBFD_NFYB_HMF domain-containing protein. (157 aa)
	A0A0D3BBK2	CBFD_NFYB_HMF domain-containing protein. (186 aa)
	A0A0D3BDL5	CBFD_NFYB_HMF domain-containing protein. (206 aa)
	A0A0D3BF48	J domain-containing protein. (475 aa)
	A0A0D3BFE6	CBFD_NFYB_HMF domain-containing protein. (246 aa)
	A0A0D3BMH4	Uncharacterized protein. (773 aa)
	A0A0D3BNI4	CBFD_NFYB_HMF domain-containing protein. (155 aa)
	A0A0D3BQQ9	CBFD_NFYB_HMF domain-containing protein. (143 aa)
	A0A0D3BZK1	Uncharacterized protein. (193 aa)
	A0A0D3C4P7	CBFD_NFYB_HMF domain-containing protein. (173 aa)
	A0A0D3C8M0	CBFD_NFYB_HMF domain-containing protein. (277 aa)

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3AD93	A0A0D3BFE6	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.965
A0A0D3AD93	A0A0D3BZK1	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.843
A0A0D3AD93	A0A0D3C8M0	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.877
A0A0D3AD93	A0A0D3CR56	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.888
A0A0D3AD93	A0A0D3DNJ2	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.880
A0A0D3AD93	A0A0D3DQV8	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.417
A0A0D3AD93	A0A0D3DRF4	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.974
A0A0D3AD93	A0A0D3E218	CBFD_NFYB_HMF domain-containing protein.	SAP domain-containing protein.	0.966
A0A0D3AHU2	A0A0D3AYP1	Uncharacterized protein.	J domain-containing protein.	0.479
A0A0D3AHU2	A0A0D3BF48	Uncharacterized protein.	J domain-containing protein.	0.479
A0A0D3AV03	A0A0D3BFE6	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.850
A0A0D3AV03	A0A0D3BZK1	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.905
A0A0D3AV03	A0A0D3C8M0	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.964
A0A0D3AV03	A0A0D3CR56	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.965
A0A0D3AV03	A0A0D3DNJ2	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.964
A0A0D3AV03	A0A0D3DQV8	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.426
A0A0D3AV03	A0A0D3DRF4	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.854
A0A0D3AV03	A0A0D3E218	CBFD_NFYB_HMF domain-containing protein.	SAP domain-containing protein.	0.851
A0A0D3AYP1	A0A0D3AHU2	J domain-containing protein.	Uncharacterized protein.	0.479
A0A0D3AYP1	A0A0D3EHQ9	J domain-containing protein.	Uncharacterized protein.	0.479