44 items (Brassica oleracea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3DWS7	Uncharacterized protein. (301 aa)
	A0A0D3DSR1	CBFD_NFYB_HMF domain-containing protein. (181 aa)
	A0A0D3DRF4	CBFD_NFYB_HMF domain-containing protein. (265 aa)
	A0A0D3DQV8	CBFD_NFYB_HMF domain-containing protein. (229 aa)
	A0A0D3D9X0	CBFD_NFYB_HMF domain-containing protein. (134 aa)
	A0A0D3D7N6	CBFD_NFYB_HMF domain-containing protein. (774 aa)
	A0A0D3D079	Uncharacterized protein. (343 aa)
	A0A0D3D078	RNase H domain-containing protein. (509 aa)
	A0A0D3BNI4	CBFD_NFYB_HMF domain-containing protein. (155 aa)
	A0A0D3BN18	Uncharacterized protein. (232 aa)
	A0A0D3AV03	CBFD_NFYB_HMF domain-containing protein. (185 aa)
	A0A0D3AQ69	Uncharacterized protein. (319 aa)
	A0A0D3AIR2	Uncharacterized protein. (213 aa)
	A0A0D3AFG3	Uncharacterized protein. (271 aa)
	A0A0D3ADS6	Uncharacterized protein. (303 aa)
	A0A0D3AD93	CBFD_NFYB_HMF domain-containing protein. (157 aa)
	A0A0D2ZY48	Uncharacterized protein. (70 aa)
	A0A0D3D075	Uncharacterized protein. (255 aa)
	A0A0D3CX20	Uncharacterized protein. (523 aa)
	A0A0D3CSB3	Uncharacterized protein. (235 aa)
	A0A0D3BDL5	CBFD_NFYB_HMF domain-containing protein. (206 aa)
	A0A0D3BBK2	CBFD_NFYB_HMF domain-containing protein. (186 aa)
	A0A0D3B9V3	Uncharacterized protein. (281 aa)
	A0A0D3B755	CBFD_NFYB_HMF domain-containing protein. (157 aa)
	A0A0D3B5R9	Uncharacterized protein. (304 aa)
	A0A0D3EHB5	Uncharacterized protein. (267 aa)
	A0A0D3CHV5	Uncharacterized protein. (303 aa)
	A0A0D3BQQ9	CBFD_NFYB_HMF domain-containing protein. (143 aa)
	A0A0D3BS17	Uncharacterized protein. (195 aa)
	A0A0D3B5R8	CBFD_NFYB_HMF domain-containing protein. (105 aa)
	A0A0D3B5C3	CBFD_NFYB_HMF domain-containing protein. (220 aa)
	A0A0D3B0V3	Uncharacterized protein. (258 aa)
	A0A0D3C4P7	CBFD_NFYB_HMF domain-containing protein. (173 aa)
	A0A0D3C8M4	CBFD_NFYB_HMF domain-containing protein. (132 aa)
	A0A0D3BYB1	Uncharacterized protein. (146 aa)
	A0A0D3CC98	CBFD_NFYB_HMF domain-containing protein. (320 aa)
	A0A0D3EHD0	Uncharacterized protein. (311 aa)
	A0A0D3CJR4	CBFD_NFYB_HMF domain-containing protein. (164 aa)
	A0A0D3EFY4	Uncharacterized protein. (286 aa)
	A0A0D3E7A5	CBFD_NFYB_HMF domain-containing protein. (207 aa)
	A0A0D3E2U9	CBFD_NFYB_HMF domain-containing protein. (208 aa)
	A0A0D3CR56	CBFD_NFYB_HMF domain-containing protein. (180 aa)
	A0A0D3CMI2	Uncharacterized protein. (675 aa)
	A0A0D3CKE0	Uncharacterized protein. (107 aa)

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2ZY48	A0A0D3AD93	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3AV03	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3B5C3	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3B5R8	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3B5R9	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A0D2ZY48	A0A0D3B755	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3BBK2	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3BDL5	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3BNI4	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3BQQ9	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3C4P7	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3C8M4	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3CC98	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3CJR4	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3CR56	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.590
A0A0D2ZY48	A0A0D3D7N6	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3D9X0	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3DQV8	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461
A0A0D2ZY48	A0A0D3DRF4	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.590
A0A0D2ZY48	A0A0D3DSR1	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.461