34 items (Brassica oleracea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3E218	SAP domain-containing protein. (427 aa)
	A0A0D3E7H0	C2H2-type domain-containing protein. (451 aa)
	A0A0D3E0N5	Uncharacterized protein. (254 aa)
	A0A0D3DZB2	Uncharacterized protein. (206 aa)
	A0A0D3DX42	Prephenate/arogenate dehydrogenase domain-containing protein. (1208 aa)
	A0A0D3DPU0	Uncharacterized protein. (769 aa)
	A0A0D3DKG1	Uncharacterized protein. (411 aa)
	A0A0D3DBJ7	Uncharacterized protein. (265 aa)
	A0A0D3DB73	Uridine kinase; Belongs to the uridine kinase family. (483 aa)
	A0A0D3DAA0	C2H2-type domain-containing protein. (442 aa)
	A0A0D3D208	Uncharacterized protein. (765 aa)
	A0A0D3CYV5	C2H2-type domain-containing protein. (413 aa)
	A0A0D3CXX5	C2H2-type domain-containing protein. (411 aa)
	A0A0D3CNA8	Uncharacterized protein. (280 aa)
	A0A0D3CJR1	Uncharacterized protein. (716 aa)
	A0A0D3CCZ7	AMPK1_CBM domain-containing protein. (507 aa)
	A0A0D3CAK1	Uncharacterized protein. (811 aa)
	A0A0D3C708	Uncharacterized protein. (209 aa)
	A0A0D3C0B4	Uridine kinase; Belongs to the uridine kinase family. (480 aa)
	A0A0D3BZW2	AMPK1_CBM domain-containing protein. (283 aa)
	A0A0D3BP54	Thioredoxin reductase. (543 aa)
	A0A0D3BFU2	Uncharacterized protein. (383 aa)
	A0A0D3BFE6	CBFD_NFYB_HMF domain-containing protein. (246 aa)
	A0A0D3BBK7	Uncharacterized protein. (713 aa)
	A0A0D3B9C8	Uncharacterized protein. (286 aa)
	A0A0D3B699	Thioredoxin reductase. (511 aa)
	A0A0D3AWM3	Uncharacterized protein. (293 aa)
	A0A0D3AW48	Uridine kinase; Belongs to the uridine kinase family. (483 aa)
	A0A0D3AVC9	C2H2-type domain-containing protein. (443 aa)
	A0A0D3ANV2	Uncharacterized protein. (158 aa)
	A0A0D3ANV1	Uncharacterized protein. (429 aa)
	A0A0D3AD86	Uncharacterized protein. (612 aa)
	A0A0D3A2N8	Uncharacterized protein. (753 aa)
	A0A0D2ZTN7	Uncharacterized protein. (517 aa)

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3AD86	A0A0D3BZW2	Uncharacterized protein.	AMPK1_CBM domain-containing protein.	0.551
A0A0D3AD86	A0A0D3CCZ7	Uncharacterized protein.	AMPK1_CBM domain-containing protein.	0.489
A0A0D3ANV1	A0A0D3ANV2	Uncharacterized protein.	Uncharacterized protein.	0.454
A0A0D3ANV2	A0A0D3ANV1	Uncharacterized protein.	Uncharacterized protein.	0.454
A0A0D3ANV2	A0A0D3BZW2	Uncharacterized protein.	AMPK1_CBM domain-containing protein.	0.422
A0A0D3B699	A0A0D3BP54	Thioredoxin reductase.	Thioredoxin reductase.	0.801
A0A0D3BBK7	A0A0D3BZW2	Uncharacterized protein.	AMPK1_CBM domain-containing protein.	0.551
A0A0D3BBK7	A0A0D3CCZ7	Uncharacterized protein.	AMPK1_CBM domain-containing protein.	0.489
A0A0D3BP54	A0A0D3B699	Thioredoxin reductase.	Thioredoxin reductase.	0.801
A0A0D3BZW2	A0A0D3AD86	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.551
A0A0D3BZW2	A0A0D3ANV2	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.422
A0A0D3BZW2	A0A0D3BBK7	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.551
A0A0D3BZW2	A0A0D3CJR1	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.551
A0A0D3CCZ7	A0A0D3AD86	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.489
A0A0D3CCZ7	A0A0D3BBK7	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.489
A0A0D3CCZ7	A0A0D3CJR1	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.489
A0A0D3CJR1	A0A0D3BZW2	Uncharacterized protein.	AMPK1_CBM domain-containing protein.	0.551
A0A0D3CJR1	A0A0D3CCZ7	Uncharacterized protein.	AMPK1_CBM domain-containing protein.	0.489