(19 nodes) LexA/Signal peptidase-like superfamily network (Brassica oleracea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3CQF8	Signal peptidase I. (180 aa)
	A0A0D2ZUZ6	Peptidase_S26 domain-containing protein. (292 aa)
	A0A0D2ZWL0	Uncharacterized protein. (112 aa)
	A0A0D3CRB1	Signal peptidase I. (371 aa)
	A0A0D3D5V7	Peptidase_S24 domain-containing protein. (206 aa)
	A0A0D3DJ44	Uncharacterized protein. (213 aa)
	A0A0D3DYP3	Peptidase_S26 domain-containing protein. (360 aa)
	A0A0D3EGB0	Peptidase_S24 domain-containing protein. (166 aa)
	A0A0D3ADA9	Signal peptidase I. (180 aa)
	A0A0D3AEZ9	Peptidase_S24 domain-containing protein. (142 aa)
	A0A0D3AF00	Peptidase_S24 domain-containing protein. (103 aa)
	A0A0D3B0K7	Uncharacterized protein. (166 aa)
	A0A0D3B4C3	Uncharacterized protein. (206 aa)
	A0A0D3BML0	Signal peptidase I. (180 aa)
	A0A0D3BML5	Signal peptidase I. (143 aa)
	A0A0D3C331	Peptidase_S26 domain-containing protein. (324 aa)
	A0A0D3C861	Peptidase_S26 domain-containing protein. (395 aa)
	A0A0D3CLS5	Uncharacterized protein. (180 aa)
	A0A0D3EHR8	Peptidase_S24 domain-containing protein. (186 aa)

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ADA9	A0A0D3BML0	Signal peptidase I.	Signal peptidase I.	0.901
A0A0D3ADA9	A0A0D3CQF8	Signal peptidase I.	Signal peptidase I.	0.900
A0A0D3AEZ9	A0A0D3CLS5	Peptidase_S24 domain-containing protein.	Uncharacterized protein.	0.900
A0A0D3B0K7	A0A0D3B4C3	Uncharacterized protein.	Uncharacterized protein.	0.511
A0A0D3B4C3	A0A0D3B0K7	Uncharacterized protein.	Uncharacterized protein.	0.511
A0A0D3B4C3	A0A0D3C861	Uncharacterized protein.	Peptidase_S26 domain-containing protein.	0.453
A0A0D3B4C3	A0A0D3D5V7	Uncharacterized protein.	Peptidase_S24 domain-containing protein.	0.418
A0A0D3B4C3	A0A0D3DYP3	Uncharacterized protein.	Peptidase_S26 domain-containing protein.	0.453
A0A0D3B4C3	A0A0D3EGB0	Uncharacterized protein.	Peptidase_S24 domain-containing protein.	0.511
A0A0D3B4C3	A0A0D3EHR8	Uncharacterized protein.	Peptidase_S24 domain-containing protein.	0.418
A0A0D3BML0	A0A0D3ADA9	Signal peptidase I.	Signal peptidase I.	0.901
A0A0D3BML0	A0A0D3CQF8	Signal peptidase I.	Signal peptidase I.	0.900
A0A0D3C861	A0A0D3B4C3	Peptidase_S26 domain-containing protein.	Uncharacterized protein.	0.453
A0A0D3CLS5	A0A0D3AEZ9	Uncharacterized protein.	Peptidase_S24 domain-containing protein.	0.900
A0A0D3CQF8	A0A0D3ADA9	Signal peptidase I.	Signal peptidase I.	0.900
A0A0D3CQF8	A0A0D3BML0	Signal peptidase I.	Signal peptidase I.	0.900
A0A0D3D5V7	A0A0D3B4C3	Peptidase_S24 domain-containing protein.	Uncharacterized protein.	0.418
A0A0D3DYP3	A0A0D3B4C3	Peptidase_S26 domain-containing protein.	Uncharacterized protein.	0.453
A0A0D3EGB0	A0A0D3B4C3	Peptidase_S24 domain-containing protein.	Uncharacterized protein.	0.511
A0A0D3EHR8	A0A0D3B4C3	Peptidase_S24 domain-containing protein.	Uncharacterized protein.	0.418