94 items (Brassica oleracea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3BWT6	WAT1-related protein. (259 aa)
	A0A0D3BM46	MAT1 domain-containing protein. (177 aa)
	A0A0D3BHF7	Histone H2B; Belongs to the histone H2B family. (132 aa)
	A0A0D3BCR0	Uncharacterized protein. (206 aa)
	A0A0D3BCK3	Uncharacterized protein. (191 aa)
	A0A0D3BA51	Uncharacterized protein. (446 aa)
	A0A0D3B783	Histone H2B; Belongs to the histone H2B family. (151 aa)
	A0A0D3B6A5	Uncharacterized protein. (250 aa)
	A0A0D3B2X3	Uncharacterized protein. (210 aa)
	A0A0D3B2I5	Histone H2B; Belongs to the histone H2B family. (136 aa)
	A0A0D3B2D1	Histone H2B; Belongs to the histone H2B family. (142 aa)
	A0A0D3B204	Uncharacterized protein. (208 aa)
	A0A0D3B009	Uncharacterized protein. (170 aa)
	A0A0D3AXA0	CYCLIN domain-containing protein; Belongs to the cyclin family. (335 aa)
	A0A0D3AUY8	WAT1-related protein. (361 aa)
	A0A0D3AQU0	Uncharacterized protein. (197 aa)
	A0A0D3AP91	Uncharacterized protein. (592 aa)
	A0A0D3AKU9	Histone H2B; Belongs to the histone H2B family. (142 aa)
	A0A0D3AHZ6	Uncharacterized protein. (204 aa)
	A0A0D3AHH3	SANTA domain-containing protein. (495 aa)
	A0A0D3AFN7	C1_2 domain-containing protein. (202 aa)
	A0A0D3AFN6	Phorbol-ester/DAG-type domain-containing protein. (373 aa)
	A0A0D3AFN5	Phorbol-ester/DAG-type domain-containing protein. (638 aa)
	A0A0D3AF66	Uncharacterized protein. (448 aa)
	A0A0D3ADT7	Uncharacterized protein. (429 aa)
	A0A0D3AAT3	Uncharacterized protein. (71 aa)
	A0A0D3AAE3	RPOLD domain-containing protein. (399 aa)
	A0A0D3AA17	NAB domain-containing protein. (935 aa)
	A0A0D3AA16	SANTA domain-containing protein. (271 aa)
	A0A0D3A7F5	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (505 aa)
	A0A0D2ZPP3	Uncharacterized protein. (51 aa)
	A0A0D3BY30	Uncharacterized protein. (235 aa)
	A0A0D3BYA8	Histone H2B; Belongs to the histone H2B family. (122 aa)
	A0A0D3BZZ8	Uncharacterized protein. (144 aa)
	A0A0D3C051	Phorbol-ester/DAG-type domain-containing protein. (605 aa)
	A0A0D3C080	Uncharacterized protein. (321 aa)
	A0A0D3C0F8	Uncharacterized protein. (827 aa)
	A0A0D3C0L9	C1_2 domain-containing protein. (230 aa)
	A0A0D3C2P1	Histone H2B; Belongs to the histone H2B family. (154 aa)
	A0A0D3C370	Uncharacterized protein. (193 aa)
	A0A0D3C464	Uncharacterized protein. (597 aa)
	A0A0D3C5L8	Uncharacterized protein. (255 aa)
	A0A0D3BVM8	Autophagy_N domain-containing protein. (251 aa)
	A0A0D3C8G2	Histone domain-containing protein; Belongs to the histone H2B family. (319 aa)
	A0A0D3C8U5	NAB domain-containing protein. (845 aa)
	A0A0D3C9M7	Uncharacterized protein. (70 aa)
	A0A0D3CB70	Uncharacterized protein. (300 aa)
	A0A0D3CBQ3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (119 aa)
	A0A0D3CH99	Uncharacterized protein. (206 aa)
	A0A0D3CHJ8	Uncharacterized protein. (177 aa)
	A0A0D3CJ48	Uncharacterized protein. (96 aa)
	A0A0D3CJ49	Uncharacterized protein. (61 aa)
	A0A0D3CM33	Uncharacterized protein. (395 aa)
	A0A0D3CNV5	BSD domain-containing protein. (299 aa)
	A0A0D3CQR8	Uncharacterized protein. (116 aa)
	A0A0D3CR13	Uncharacterized protein. (127 aa)
	A0A0D3CSF2	Uncharacterized protein. (200 aa)
	A0A0D3CT86	Helicase ATP-binding domain-containing protein. (488 aa)
	A0A0D3CTN9	Histone H2B; Belongs to the histone H2B family. (138 aa)
	A0A0D3DUD8	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (146 aa)
	A0A0D3DUJ8	Uncharacterized protein. (319 aa)
	A0A0D3DYJ4	Uncharacterized protein. (92 aa)
	A0A0D3DYM2	Uncharacterized protein. (185 aa)
	A0A0D3E0J0	Uncharacterized protein. (144 aa)
	A0A0D3E139	CYCLIN domain-containing protein; Belongs to the cyclin family. (334 aa)
	A0A0D3E581	RPOLD domain-containing protein. (382 aa)
	A0A0D3E5M5	NAB domain-containing protein. (946 aa)
	A0A0D3ECX9	Histone H2B; Belongs to the histone H2B family. (150 aa)
	A0A0D3EDA3	Histone H2B; Belongs to the histone H2B family. (141 aa)
	A0A0D3CUE1	Uncharacterized protein. (734 aa)
	A0A0D3D5W1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1188 aa)
	A0A0D3D7W9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (119 aa)
	A0A0D3D8N0	Uncharacterized protein. (183 aa)
	A0A0D3D9V4	WAT1-related protein. (345 aa)
	A0A0D3DBT5	Uncharacterized protein. (437 aa)
	A0A0D3DBZ9	Uncharacterized protein. (502 aa)
	A0A0D3DCG8	Uncharacterized protein. (245 aa)
	A0A0D3DEF8	WAT1-related protein. (359 aa)
	A0A0D3DIM4	Helicase ATP-binding domain-containing protein. (758 aa)
	A0A0D3DIY5	General transcription factor IIH subunit. (422 aa)
	A0A0D3DJY0	Uncharacterized protein. (143 aa)
	A0A0D3DMA0	Uncharacterized protein. (58 aa)
	A0A0D3DP43	Uncharacterized protein. (71 aa)
	A0A0D3DQ66	Uncharacterized protein. (261 aa)
	A0A0D3DSU5	Histone H2B; Belongs to the histone H2B family. (138 aa)
	A0A0D3DTU3	Uncharacterized protein. (230 aa)
	A0A0D3DTY1	Uncharacterized protein. (1926 aa)
	A0A0D3DU03	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1643 aa)
	A0A0D3BU25	Histone H2B; Belongs to the histone H2B family. (148 aa)
	A0A0D3BSC5	Phorbol-ester/DAG-type domain-containing protein. (564 aa)
	A0A0D3BSC4	Uncharacterized protein. (557 aa)
	A0A0D3BS16	Uncharacterized protein. (610 aa)
	A0A0D3BN94	Uncharacterized protein. (200 aa)
	A0A0D3BMY7	Uncharacterized protein. (100 aa)

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2ZPP3	A0A0D3A7F5	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.899
A0A0D2ZPP3	A0A0D3AAE3	Uncharacterized protein.	RPOLD domain-containing protein.	0.890
A0A0D2ZPP3	A0A0D3AAT3	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0D2ZPP3	A0A0D3ADT7	Uncharacterized protein.	Uncharacterized protein.	0.952
A0A0D2ZPP3	A0A0D3AF66	Uncharacterized protein.	Uncharacterized protein.	0.668
A0A0D2ZPP3	A0A0D3AHZ6	Uncharacterized protein.	Uncharacterized protein.	0.637
A0A0D2ZPP3	A0A0D3AP91	Uncharacterized protein.	Uncharacterized protein.	0.798
A0A0D2ZPP3	A0A0D3AQU0	Uncharacterized protein.	Uncharacterized protein.	0.947
A0A0D2ZPP3	A0A0D3AXA0	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.701
A0A0D2ZPP3	A0A0D3B009	Uncharacterized protein.	Uncharacterized protein.	0.637
A0A0D2ZPP3	A0A0D3B204	Uncharacterized protein.	Uncharacterized protein.	0.823
A0A0D2ZPP3	A0A0D3B2X3	Uncharacterized protein.	Uncharacterized protein.	0.823
A0A0D2ZPP3	A0A0D3BA51	Uncharacterized protein.	Uncharacterized protein.	0.668
A0A0D2ZPP3	A0A0D3BCK3	Uncharacterized protein.	Uncharacterized protein.	0.722
A0A0D2ZPP3	A0A0D3BCR0	Uncharacterized protein.	Uncharacterized protein.	0.823
A0A0D2ZPP3	A0A0D3BM46	Uncharacterized protein.	MAT1 domain-containing protein.	0.899
A0A0D2ZPP3	A0A0D3BN94	Uncharacterized protein.	Uncharacterized protein.	0.637
A0A0D2ZPP3	A0A0D3BS16	Uncharacterized protein.	Uncharacterized protein.	0.827
A0A0D2ZPP3	A0A0D3BY30	Uncharacterized protein.	Uncharacterized protein.	0.765
A0A0D2ZPP3	A0A0D3BZZ8	Uncharacterized protein.	Uncharacterized protein.	0.935