STRINGSTRING
folB folB holB holB elaA elaA batA batA batB batB prsA prsA hemB hemB hemF hemF hemE hemE hemD hemD hemC hemC hemA hemA hemH hemH KQS_00735 KQS_00735 KQS_00845 KQS_00845 KQS_00915 KQS_00915 KQS_00945 KQS_00945 KQS_01020 KQS_01020 tdk tdk KQS_01450 KQS_01450 polA polA nusA nusA KQS_01625 KQS_01625 queG queG sprA sprA cyoE cyoE ppnK ppnK pdxJ pdxJ dxs dxs KQS_02040 KQS_02040 KQS_02120 KQS_02120 purH purH KQS_02285 KQS_02285 pdhB pdhB thyA thyA dfrA dfrA accD accD folE folE purE purE purK purK hpt hpt adk adk KQS_02715 KQS_02715 rpoA rpoA carA carA queA queA kynU kynU kmo kmo ygcF ygcF rocD rocD pdhA pdhA pdhC pdhC ugd ugd KQS_03440 KQS_03440 KQS_03625 KQS_03625 ribD ribD folC folC pyrD pyrD KQS_03760 KQS_03760 purB purB guaB guaB KQS_03795 KQS_03795 KQS_03830 KQS_03830 nadC nadC nusB nusB folE2 folE2 folP folP KQS_04340 KQS_04340 KQS_04375 KQS_04375 tgt tgt accA accA dnaB dnaB KQS_04515 KQS_04515 cobU cobU bluB/cobT bluB/cobT cobS cobS gpmA gpmA fcl fcl coxA coxA KQS_04855 KQS_04855 purA purA cmk cmk pyrF pyrF dnaX dnaX KQS_05585 KQS_05585 hemN hemN pyrE pyrE coaD coaD KQS_06435 KQS_06435 KQS_06450 KQS_06450 purM purM guaA guaA KQS_06510 KQS_06510 pyrG pyrG proC proC KQS_06615 KQS_06615 kdsB kdsB prpE prpE acsA acsA KQS_06905 KQS_06905 KQS_06995 KQS_06995 KQS_07030 KQS_07030 pdxH pdxH pyrB pyrB trpA trpA trpB trpB trpF trpF trpC trpC trpD trpD KQS_07325 KQS_07325 rho rho KQS_07425 KQS_07425 murA murA KQS_07500 KQS_07500 KQS_07635 KQS_07635 KQS_07745 KQS_07745 KQS_08300 KQS_08300 KQS_08465 KQS_08465 KQS_08545 KQS_08545 ribBA ribBA apt apt purC purC dnaN dnaN KQS_09045 KQS_09045 serC serC coaE coaE coaBC coaBC KQS_09395 KQS_09395 priA priA nadD nadD gmk gmk ndk ndk udk udk purL purL holA holA KQS_09965 KQS_09965 pyrC2 pyrC2 phnP phnP KQS_10005 KQS_10005 KQS_10020 KQS_10020 cinA cinA folD folD ygcM ygcM ribH ribH KQS_10635 KQS_10635 lipA lipA KQS_10695 KQS_10695 rpoC rpoC rpoB rpoB nusG nusG hemL hemL rpoD rpoD KQS_11770 KQS_11770 dnaG dnaG nadE nadE apaG apaG purT purT KQS_12055 KQS_12055 nrdA nrdA nrdB nrdB bioB bioB ribF ribF coaX coaX KQS_12255 KQS_12255 dnaE/dnaQ dnaE/dnaQ bioA bioA bioD bioD atpC atpC atpD atpD KQS_12695 KQS_12695 dut dut atpG atpG atpA atpA atpH atpH atpF atpF atpE atpE atpB atpB ribE ribE pdxA pdxA rpoN rpoN pyrC1 pyrC1 KQS_13195 KQS_13195 pyrH pyrH thiL thiL purF purF purN purN dinB dinB ygfA ygfA KQS_13725 KQS_13725 upp upp purD purD rmlD rmlD rmlC rmlC
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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folBDihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (118 aa)
holBProbable DNA polymerase III, delta prime subunit. (386 aa)
elaAElaA protein. (148 aa)
batABatA protein. (333 aa)
batBBatB protein. (341 aa)
prsARibose-phosphate diphosphokinase. (313 aa)
hemBPorphobilinogen synthase; Belongs to the ALAD family. (331 aa)
hemFCoproporphyrinogen oxidase. (300 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (340 aa)
hemDUroporphyrinogen-III synthase. (221 aa)
hemCHydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (308 aa)
hemAGlutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (422 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (339 aa)
KQS_00735Probable transmembrane protein of unknown function. (180 aa)
KQS_00845Protein of unknown function. (489 aa)
KQS_00915Protein of unknown function. (106 aa)
KQS_00945Probable Helicase. (399 aa)
KQS_01020Protein of unknown function. (368 aa)
tdkThymidine kinase. (197 aa)
KQS_01450Probable 6-pyruvoyltetrahydrobiopterin synthase. (149 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (948 aa)
nusATranscription elongation protein NusA; Participates in both transcription termination and antitermination. (413 aa)
KQS_01625Probable Acetate--CoA ligase. (526 aa)
queGPutative 4Fe-4S binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (311 aa)
sprASprA protein. (2372 aa)
cyoEProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (296 aa)
ppnKNAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. (294 aa)
pdxJPyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. (237 aa)
dxs1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (589 aa)
KQS_02040Probable transmembrane protein of unknown function; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. (216 aa)
KQS_02120Protein of unknown function. (488 aa)
purHBifunctional purine biosynthesis protein PurH. (508 aa)
KQS_02285Probable deoxynucleoside kinase. (204 aa)
pdhBPyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (325 aa)
thyAThymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (274 aa)
dfrADihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (161 aa)
accDAcetyl-coenzyme A carboxylase carboxyl transferase beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. (284 aa)
folEGTP cyclohydrolase I. (228 aa)
purEPhosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (160 aa)
purKPhosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (383 aa)
hptHypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (176 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (190 aa)
KQS_02715Protein of unknown function. (206 aa)
rpoADNA-directed RNA polymerase alpha subunit RpoA; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (330 aa)
carACarbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (369 aa)
queAS-adenosylmethionine:tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (349 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (429 aa)
kmoKynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. (446 aa)
ygcFProtein of unknown function YgcF; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (224 aa)
rocDOrnithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (414 aa)
pdhAPyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (332 aa)
pdhCPyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). (536 aa)
ugdUDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (462 aa)
KQS_03440Protein of unknown function, Putative carbamoyl-phosphate synthase. (369 aa)
KQS_03625Probable hydrolase (HAD superfamily). (198 aa)
ribDRiboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (346 aa)
folCBifunctional protein : Folylpolyglutamate synthase and Dihydrofolate synthase. (404 aa)
pyrDDihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (346 aa)
KQS_03760RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (176 aa)
purBAdenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (447 aa)
guaBIMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (490 aa)
KQS_03795Aminocarboxylic acid CoA-ligase. (419 aa)
KQS_03830RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
nadCNicotinate-nucleotide diphosphorylase (carboxylating); Belongs to the NadC/ModD family. (285 aa)
nusBN utilization substance protein B homolog (NusB protein); Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (313 aa)
folE2GTP cyclohydrolase I. (223 aa)
folPDihydropteroate synthase. (257 aa)
KQS_04340RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
KQS_04375Probable thiamine diphosphokinase. (220 aa)
tgtQueuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] (376 aa)
accAAcetyl-coenzyme A carboxylase carboxyl transferase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (317 aa)
dnaBReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (519 aa)
KQS_04515Probable transmembrane protein of unknown function. (171 aa)
cobUBifunctional protein cobU : adenosylcobinamide kinase and adenosylcobinamide-phosphate guanylyltransferase. (168 aa)
bluB/cobTNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (558 aa)
cobSAdenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (253 aa)
gpmAPhosphoglycerate mutase. (170 aa)
fclGDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (307 aa)
coxACytochrome c oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (341 aa)
KQS_04855Protein of unknown function. (104 aa)
purAAdenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (423 aa)
cmkCytidylate kinase. (229 aa)
pyrFOrotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. (275 aa)
dnaXProbable DNA polymerase III subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (361 aa)
KQS_05585Probable DNA polymerase III subunit. (453 aa)
hemNOxygen-independent coproporphyrinogen III oxidase HemN; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (454 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (216 aa)
coaDPantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (151 aa)
KQS_06435Protein of unknown function. (126 aa)
KQS_06450Protein of unknown function; Belongs to the Cob(I)alamin adenosyltransferase family. (192 aa)
purMPhosphoribosylformylglycinamidine cyclo-ligase. (392 aa)
guaAGMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. (509 aa)
KQS_06510Protein of unknown function. (74 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (535 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (272 aa)
KQS_06615Protein of unknown function, putative methyltransferase. (391 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (242 aa)
prpEPropionate--CoA ligase. (630 aa)
acsAAcetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. (635 aa)
KQS_06905Probable exonuclease. (197 aa)
KQS_06995Probable transmembrane protein of unknown function. (166 aa)
KQS_07030Protein of unknown function. (120 aa)
pdxHPyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (215 aa)
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (309 aa)
trpATryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (253 aa)
trpBTryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (393 aa)
trpFPhosphoribosylanthranilate isomerase; Belongs to the TrpF family. (217 aa)
trpCIndole-3-glycerol phosphate synthase. (260 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (334 aa)
KQS_07325RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (180 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (564 aa)
KQS_07425Protein of unknown function. (144 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (436 aa)
KQS_07500Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family. (186 aa)
KQS_07635DNA binding protein of unknown function (CHC2 zinc finger). (761 aa)
KQS_07745Protein of unknown function. (366 aa)
KQS_08300Probable Phosphopantothenate--cysteine ligase. (225 aa)
KQS_08465RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (194 aa)
KQS_08545Protein of unknown function. (351 aa)
ribBABifunctional enzyme : 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. (376 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (170 aa)
purCPhosphoribosylaminoimidazolesuccinocarboxamide synthase; Belongs to the SAICAR synthetase family. (316 aa)
dnaNDNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (373 aa)
KQS_09045Probable sugar phosphate nucleotydyl transferase. (390 aa)
serCPhosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (358 aa)
coaEDephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (195 aa)
coaBCCoenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (408 aa)
KQS_09395Protein of unknown function. (104 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (812 aa)
nadDNicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (193 aa)
gmkGuanylate kinase; Essential for recycling GMP and indirectly, cGMP. (191 aa)
ndkNucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (139 aa)
udkUridine kinase. (203 aa)
purLPhosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. (1225 aa)
holAProbable DNA polymerase III, delta subunit. (334 aa)
KQS_09965Probable transmembrane protein of unknown function. (641 aa)
pyrC2Dihydroorotase. (414 aa)
phnPPhnP protein. (255 aa)
KQS_10005Protein of unknown function. (485 aa)
KQS_10020RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa)
cinACinA-like protein; Belongs to the CinA family. (415 aa)
folDMethenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (292 aa)
ygcMProbable 6-pyruvoyltetrahydrobiopterin synthase. (136 aa)
ribHRiboflavin synthase, beta subunit; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (161 aa)
KQS_10635RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (171 aa)
lipALipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (290 aa)
KQS_10695Protein of unknown function. (364 aa)
rpoCDNA-directed RNA polymerase beta' subunit RpoC; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1432 aa)
rpoBDNA-directed RNA polymerase beta subunit RpoB; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa)
nusGTranscription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. (183 aa)
hemLGlutamate-1-semialdehyde aminotransferase. (428 aa)
rpoDRNA polymerase sigma-70 factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (287 aa)
KQS_11770RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (658 aa)
nadENH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. (270 aa)
apaGProtein ApaG. (128 aa)
purTPhosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. (389 aa)
KQS_12055Deoxyguanosine kinase; Probable bifunctional protein : 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase and deoxynucleoside kinase. (378 aa)
nrdARibonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (795 aa)
nrdBRibonucleoside-diphosphate reductase, beta subunit. (325 aa)
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (361 aa)
ribFIfunctional riboflavin biosynthesis protein RibF : Riboflavin kinase and FMN adenylyltransferase; Belongs to the ribF family. (308 aa)
coaXPutative transcriptional regulator; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. (244 aa)
KQS_12255Probable coproporphyrinogen oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (377 aa)
dnaE/dnaQProbable DNA polymerase III, alpha and epsilon subunits. (1511 aa)
bioAAdenosylmethionine--8-amino-7-oxononanoate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
bioDDethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (205 aa)
atpCATP synthase epsilon subunit. (93 aa)
atpDATP synthase beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (504 aa)
KQS_12695Putative phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (318 aa)
dutdUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (144 aa)
atpGATP synthase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (285 aa)
atpAATP synthase alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (524 aa)
atpHATP synthase delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (175 aa)
atpFATP synthase B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (166 aa)
atpEATP synthase C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (64 aa)
atpBATP synthase A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (388 aa)
ribERiboflavin synthase, alpha subunit. (196 aa)
pdxA4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family. (349 aa)
rpoNRNA polymerase sigma-54 factor RpoN. (467 aa)
pyrC1Dihydroorotase. (446 aa)
KQS_13195Protein of unknown function. (252 aa)
pyrHUMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (235 aa)
thiLThiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. (348 aa)
purFAmidophosphoribosyltransferase. (632 aa)
purNPhosphoribosylglycinamide formyltransferase. (186 aa)
dinBDNA polymerase IV, damage-inducible protein DinB; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (359 aa)
ygfA5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (187 aa)
KQS_13725RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
uppUracil phosphoribosyltransferase. (217 aa)
purDPhosphoribosylamine--glycine ligase; Belongs to the GARS family. (423 aa)
rmlDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (309 aa)
rmlCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (183 aa)
Your Current Organism:
Flavobacterium indicum
NCBI taxonomy Id: 1094466
Other names: F. indicum GPTSA100-9 = DSM 17447, Flavobacterium indicum CIP 109464, Flavobacterium indicum DSM 17447, Flavobacterium indicum DSM 17447 = GPTSA100-9, Flavobacterium indicum GPTSA100-9, Flavobacterium indicum GPTSA100-9 = DSM 17447, Flavobacterium sp. GPTSA100-9
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