STRINGSTRING
KQS_12120 KQS_12120 prc prc crt crt KQS_01460 KQS_01460 clpP clpP KQS_02210 KQS_02210 accD accD KQS_04020 KQS_04020 accA accA KQS_05535 KQS_05535 KQS_05720 KQS_05720 menB menB KQS_09720 KQS_09720 sppA sppA
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
KQS_12120Probable membrane associated S41A family C-terminal processing peptidase; Belongs to the peptidase S41A family. (531 aa)
prcProbable membrane associated S41A family C-terminal processing peptidase; Belongs to the peptidase S41A family. (544 aa)
crtProbable 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
KQS_01460Enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (248 aa)
clpPS14 family, ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (227 aa)
KQS_02210Probable S41A family C-terminal processing peptidase precursor; Belongs to the peptidase S41A family. (717 aa)
accDAcetyl-coenzyme A carboxylase carboxyl transferase beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. (284 aa)
KQS_040203-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein. (796 aa)
accAAcetyl-coenzyme A carboxylase carboxyl transferase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (317 aa)
KQS_05535Carboxyltransferase. (542 aa)
KQS_05720Probable S41 family peptidase. (524 aa)
menBNaphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. (279 aa)
KQS_09720Propionyl-CoA carboxylase, beta subunit. (513 aa)
sppAProtease IV (signal peptide peptidase). (590 aa)
Your Current Organism:
Flavobacterium indicum
NCBI taxonomy Id: 1094466
Other names: F. indicum GPTSA100-9 = DSM 17447, Flavobacterium indicum CIP 109464, Flavobacterium indicum DSM 17447, Flavobacterium indicum DSM 17447 = GPTSA100-9, Flavobacterium indicum GPTSA100-9, Flavobacterium indicum GPTSA100-9 = DSM 17447, Flavobacterium sp. GPTSA100-9
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