STRINGSTRING
Tsac_1612 Tsac_1612 Tsac_1613 Tsac_1613 Tsac_1614 Tsac_1614 Tsac_1615 Tsac_1615 Tsac_1880 Tsac_1880
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tsac_1612KEGG: txy:Thexy_1105 hypothetical protein. (75 aa)
Tsac_1613KEGG: txy:Thexy_1106 oligoendopeptidase F; TIGRFAM: Peptidase M3B, oligoendopeptidase F; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; Peptidase M3B, oligopeptidase F, N-terminal. (599 aa)
Tsac_1614KEGG: txy:Thexy_1107 L-serine dehydratase, iron-sulfur-dependent, beta subunit; TIGRFAM: Iron-sulphur-dependent L-serine dehydratase beta subunit; PFAM: Serine dehydratase beta chain; Amino acid-binding ACT. (227 aa)
Tsac_1615KEGG: txy:Thexy_1108 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; TIGRFAM: L-serine dehydratase, alpha subunit; PFAM: Serine dehydratase alpha chain. (291 aa)
Tsac_1880PFAM: Phosphoglycerate mutase; KEGG: txy:Thexy_1233 phosphoglycerate mutase. (207 aa)
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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