STRINGSTRING
Tsac_0282 Tsac_0282 Tsac_0283 Tsac_0283 Tsac_0284 Tsac_0284 Tsac_0285 Tsac_0285 Tsac_0286 Tsac_0286 Tsac_0287 Tsac_0287 Tsac_0344 Tsac_0344 Tsac_0373 Tsac_0373 Tsac_0789 Tsac_0789 Tsac_0939 Tsac_0939 Tsac_1055 Tsac_1055 Tsac_1191 Tsac_1191 Tsac_1197 Tsac_1197 Tsac_1301 Tsac_1301 Tsac_1302 Tsac_1302 Tsac_1835 Tsac_1835 Tsac_1988 Tsac_1988 Tsac_2152 Tsac_2152 Tsac_2379 Tsac_2379 Tsac_2467 Tsac_2467
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tsac_0282PFAM: Lipase, GDSL; KEGG: txy:Thexy_2152 lipolytic protein G-D-S-L family. (240 aa)
Tsac_0283KEGG: txy:Thexy_2153 hypothetical protein. (341 aa)
Tsac_0284KEGG: txy:Thexy_2154 hypothetical protein. (323 aa)
Tsac_0285PFAM: Alcohol dehydrogenase, iron-type; KEGG: txy:Thexy_2157 alcohol dehydrogenase (NADP(+)). (389 aa)
Tsac_0286PFAM: Collagen triple helix repeat; KEGG: txy:Thexy_2158 hypothetical protein. (400 aa)
Tsac_0287PFAM: Glycosyl transferase, family 2; KEGG: txy:Thexy_2159 glycosyl transferase family 2. (356 aa)
Tsac_0344S-layer domain-containing protein; KEGG: bpb:bpr_I2473 pectin methylesterase Pme8B; PFAM: S-layer homology region; Pectinesterase, catalytic; Glycoside hydrolase, family 28; Fibronectin, type III; SMART: Fibronectin, type III. (2158 aa)
Tsac_0373TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; Peptidoglycan binding-like; KEGG: txy:Thexy_2259 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF. (453 aa)
Tsac_0789PFAM: Monogalactosyldiacylglycerol synthase; Glycosyl transferase, group 1; KEGG: txy:Thexy_0191 monogalactosyldiacylglycerol synthase. (371 aa)
Tsac_0939KEGG: txy:Thexy_0261 parallel beta-helix repeat protein. (638 aa)
Tsac_1055KEGG: txy:Thexy_0378 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup. (295 aa)
Tsac_1191KEGG: txy:Thexy_0461 delta-lactam-biosynthetic de-N-acetylase; TIGRFAM: Delta-lactam-biosynthetic de-N-acetylase; PFAM: Polysaccharide deacetylase. (320 aa)
Tsac_1197PFAM: Glycosyl transferase, family 2; KEGG: txy:Thexy_0474 glycosyl transferase family 2. (361 aa)
Tsac_1301KEGG: txy:Thexy_0574 hypothetical protein. (181 aa)
Tsac_1302PFAM: Polysaccharide deacetylase; KEGG: txy:Thexy_0575 polysaccharide deacetylase. (236 aa)
Tsac_1835PFAM: Polysaccharide deacetylase; KEGG: txy:Thexy_1279 polysaccharide deacetylase. (236 aa)
Tsac_1988Helix-turn-helix domain protein; KEGG: tit:Thit_2376 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. (431 aa)
Tsac_2152KEGG: txy:Thexy_1606 glycoside hydrolase family 18; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II. (307 aa)
Tsac_2379Sporulation protein YtaF; Probably functions as a manganese efflux pump. (199 aa)
Tsac_2467KEGG: txy:Thexy_0832 glycoside hydrolase family 18; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II. (356 aa)
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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