STRINGSTRING
Tsac_1257 Tsac_1257 Tsac_1258 Tsac_1258 Tsac_1259 Tsac_1259 Tsac_1260 Tsac_1260 Tsac_1261 Tsac_1261
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tsac_1257KEGG: txy:Thexy_0537 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI. (330 aa)
Tsac_1258Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: txy:Thexy_0538 oxidoreductase. (363 aa)
Tsac_1259PFAM: Xylose isomerase, TIM barrel domain; KEGG: txy:Thexy_0539 xylose isomerase. (247 aa)
Tsac_1260PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; KEGG: txy:Thexy_0540 xylose isomerase. (306 aa)
Tsac_1261Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: txy:Thexy_0541 oxidoreductase. (347 aa)
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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