STRINGSTRING
Tsac_0147 Tsac_0147 Tsac_0148 Tsac_0148 Tsac_0697 Tsac_0697 Tsac_1262 Tsac_1262 Tsac_0146 Tsac_0146 Tsac_1276 Tsac_1276 Tsac_2322 Tsac_2322
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tsac_0147PFAM: Glycosyl hydrolase 53; Bacterial Ig-related; Carbohydrate-binding, CenC-like; Cellulosome anchoring protein, cohesin region; S-layer homology region; KEGG: dtu:Dtur_0857 arabinogalactan endo-1,4-beta-galactosidase. (1331 aa)
Tsac_0148PFAM: Glycoside hydrolase family 2, TIM barrel; Glycoside hydrolase family 2, carbohydrate-binding; Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; KEGG: thx:Thet_1818 beta-galactosidase. (769 aa)
Tsac_0697PFAM: Glycoside hydrolase, clan GH-D; KEGG: cle:Clole_3367 alpha-galactosidase. (729 aa)
Tsac_1262PFAM: Glycoside hydrolase family 2, carbohydrate-binding; KEGG: tbo:Thebr_1975 glycoside hydrolase family 2 sugar-binding protein; Belongs to the glycosyl hydrolase 2 family. (821 aa)
Tsac_0146Ig domain protein; PFAM: Bacterial Ig-related; KEGG: ckn:Calkro_2019 arabinogalactan endo-1,4-beta-galactosidase. (319 aa)
Tsac_1276PFAM: Glycoside hydrolase, family 42, N-terminal; Beta-galactosidase trimerisation; Beta-galactosidase C-terminal; KEGG: pmo:Pmob_0829 beta-galactosidase. (692 aa)
Tsac_2322PFAM: Beta-galactosidase trimerisation; KEGG: tbo:Thebr_2228 beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (622 aa)
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.