STRINGSTRING
Tsac_0148 Tsac_0148 Tsac_1262 Tsac_1262 Tsac_1275 Tsac_1275 Tsac_2322 Tsac_2322
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tsac_0148PFAM: Glycoside hydrolase family 2, TIM barrel; Glycoside hydrolase family 2, carbohydrate-binding; Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; KEGG: thx:Thet_1818 beta-galactosidase. (769 aa)
Tsac_1262PFAM: Glycoside hydrolase family 2, carbohydrate-binding; KEGG: tbo:Thebr_1975 glycoside hydrolase family 2 sugar-binding protein; Belongs to the glycosyl hydrolase 2 family. (821 aa)
Tsac_1275KEGG: mas:Mahau_2277 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29. (423 aa)
Tsac_2322PFAM: Beta-galactosidase trimerisation; KEGG: tbo:Thebr_2228 beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (622 aa)
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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