(12 nodes) tRNA 3-trailer cleavage, endonucleolytic, and Single-stranded DNA endodeoxyribonuclease activity network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YG83_PHYSP	Metalloenzyme domain-containing protein. (448 aa)
	G4YM56_PHYSP	Endonuclease_NS domain-containing protein. (177 aa)
	G4YM57_PHYSP	Uncharacterized protein. (169 aa)
	G4YM60_PHYSP	Uncharacterized protein. (355 aa)
	G4YQA3_PHYSP	Uncharacterized protein. (254 aa)
	G4ZQ97_PHYSP	Uncharacterized protein. (573 aa)
	G4ZQF6_PHYSP	Uncharacterized protein. (561 aa)
	G4ZQN2_PHYSP	Lactamase_B domain-containing protein. (283 aa)
	G5A201_PHYSP	Uncharacterized protein. (729 aa)
	G5ADZ8_PHYSP	Lactamase_B domain-containing protein. (323 aa)
	G5ADZ9_PHYSP	Lactamase_B_4 domain-containing protein. (317 aa)
	G5AES6_PHYSP	Lactamase_B domain-containing protein. (673 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YG83_PHYSP	G4YM60_PHYSP	G4YG83	G4YM60	Metalloenzyme domain-containing protein.	Uncharacterized protein.	0.410
G4YG83_PHYSP	G5A201_PHYSP	G4YG83	G5A201	Metalloenzyme domain-containing protein.	Uncharacterized protein.	0.703
G4YM56_PHYSP	G4YM57_PHYSP	G4YM56	G4YM57	Endonuclease_NS domain-containing protein.	Uncharacterized protein.	0.718
G4YM56_PHYSP	G4YQA3_PHYSP	G4YM56	G4YQA3	Endonuclease_NS domain-containing protein.	Uncharacterized protein.	0.435
G4YM56_PHYSP	G4ZQF6_PHYSP	G4YM56	G4ZQF6	Endonuclease_NS domain-containing protein.	Uncharacterized protein.	0.548
G4YM56_PHYSP	G4ZQN2_PHYSP	G4YM56	G4ZQN2	Endonuclease_NS domain-containing protein.	Lactamase_B domain-containing protein.	0.424
G4YM56_PHYSP	G5ADZ8_PHYSP	G4YM56	G5ADZ8	Endonuclease_NS domain-containing protein.	Lactamase_B domain-containing protein.	0.435
G4YM56_PHYSP	G5ADZ9_PHYSP	G4YM56	G5ADZ9	Endonuclease_NS domain-containing protein.	Lactamase_B_4 domain-containing protein.	0.435
G4YM56_PHYSP	G5AES6_PHYSP	G4YM56	G5AES6	Endonuclease_NS domain-containing protein.	Lactamase_B domain-containing protein.	0.435
G4YM57_PHYSP	G4YM56_PHYSP	G4YM57	G4YM56	Uncharacterized protein.	Endonuclease_NS domain-containing protein.	0.718
G4YM57_PHYSP	G4YQA3_PHYSP	G4YM57	G4YQA3	Uncharacterized protein.	Uncharacterized protein.	0.435
G4YM57_PHYSP	G4ZQF6_PHYSP	G4YM57	G4ZQF6	Uncharacterized protein.	Uncharacterized protein.	0.548
G4YM57_PHYSP	G4ZQN2_PHYSP	G4YM57	G4ZQN2	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.424
G4YM57_PHYSP	G5ADZ8_PHYSP	G4YM57	G5ADZ8	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.435
G4YM57_PHYSP	G5ADZ9_PHYSP	G4YM57	G5ADZ9	Uncharacterized protein.	Lactamase_B_4 domain-containing protein.	0.435
G4YM57_PHYSP	G5AES6_PHYSP	G4YM57	G5AES6	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.435
G4YM60_PHYSP	G4YG83_PHYSP	G4YM60	G4YG83	Uncharacterized protein.	Metalloenzyme domain-containing protein.	0.410
G4YM60_PHYSP	G4YQA3_PHYSP	G4YM60	G4YQA3	Uncharacterized protein.	Uncharacterized protein.	0.435
G4YM60_PHYSP	G4ZQF6_PHYSP	G4YM60	G4ZQF6	Uncharacterized protein.	Uncharacterized protein.	0.548
G4YM60_PHYSP	G4ZQN2_PHYSP	G4YM60	G4ZQN2	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.424