(11 nodes) Mixed, incl. Organellar ribosome, and Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YF18_PHYSP	Mitochondrial/chloroplast ribosomal protein L12. (179 aa)
	G4YF32_PHYSP	Uncharacterized protein. (133 aa)
	G4YYZ2_PHYSP	Ribosomal_S10 domain-containing protein. (120 aa)
	G4YZX9_PHYSP	Uncharacterized protein. (160 aa)
	G4ZII5_PHYSP	RIBOSOMAL_L9 domain-containing protein. (219 aa)
	G4ZL13_PHYSP	Uncharacterized protein. (150 aa)
	G4ZSH6_PHYSP	Mitochondrial/chloroplast ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (148 aa)
	G4ZT00_PHYSP	Mitochondrial/chloroplast ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (324 aa)
	G5A3J1_PHYSP	Uncharacterized protein. (177 aa)
	G5A598_PHYSP	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (196 aa)
	G5A7X5_PHYSP	Uncharacterized protein. (128 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YF18_PHYSP	G4YF32_PHYSP	G4YF18	G4YF32	Mitochondrial/chloroplast ribosomal protein L12.	Uncharacterized protein.	0.999
G4YF18_PHYSP	G4YYZ2_PHYSP	G4YF18	G4YYZ2	Mitochondrial/chloroplast ribosomal protein L12.	Ribosomal_S10 domain-containing protein.	0.999
G4YF18_PHYSP	G4YZX9_PHYSP	G4YF18	G4YZX9	Mitochondrial/chloroplast ribosomal protein L12.	Uncharacterized protein.	0.999
G4YF18_PHYSP	G4ZII5_PHYSP	G4YF18	G4ZII5	Mitochondrial/chloroplast ribosomal protein L12.	RIBOSOMAL_L9 domain-containing protein.	0.999
G4YF18_PHYSP	G4ZL13_PHYSP	G4YF18	G4ZL13	Mitochondrial/chloroplast ribosomal protein L12.	Uncharacterized protein.	0.999
G4YF18_PHYSP	G4ZSH6_PHYSP	G4YF18	G4ZSH6	Mitochondrial/chloroplast ribosomal protein L12.	Mitochondrial/chloroplast ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.999
G4YF18_PHYSP	G4ZT00_PHYSP	G4YF18	G4ZT00	Mitochondrial/chloroplast ribosomal protein L12.	Mitochondrial/chloroplast ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
G4YF18_PHYSP	G5A3J1_PHYSP	G4YF18	G5A3J1	Mitochondrial/chloroplast ribosomal protein L12.	Uncharacterized protein.	0.999
G4YF18_PHYSP	G5A598_PHYSP	G4YF18	G5A598	Mitochondrial/chloroplast ribosomal protein L12.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.999
G4YF18_PHYSP	G5A7X5_PHYSP	G4YF18	G5A7X5	Mitochondrial/chloroplast ribosomal protein L12.	Uncharacterized protein.	0.999
G4YF32_PHYSP	G4YF18_PHYSP	G4YF32	G4YF18	Uncharacterized protein.	Mitochondrial/chloroplast ribosomal protein L12.	0.999
G4YF32_PHYSP	G4YYZ2_PHYSP	G4YF32	G4YYZ2	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.999
G4YF32_PHYSP	G4YZX9_PHYSP	G4YF32	G4YZX9	Uncharacterized protein.	Uncharacterized protein.	0.999
G4YF32_PHYSP	G4ZII5_PHYSP	G4YF32	G4ZII5	Uncharacterized protein.	RIBOSOMAL_L9 domain-containing protein.	0.999
G4YF32_PHYSP	G4ZL13_PHYSP	G4YF32	G4ZL13	Uncharacterized protein.	Uncharacterized protein.	0.999
G4YF32_PHYSP	G4ZSH6_PHYSP	G4YF32	G4ZSH6	Uncharacterized protein.	Mitochondrial/chloroplast ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.999
G4YF32_PHYSP	G4ZT00_PHYSP	G4YF32	G4ZT00	Uncharacterized protein.	Mitochondrial/chloroplast ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
G4YF32_PHYSP	G5A3J1_PHYSP	G4YF32	G5A3J1	Uncharacterized protein.	Uncharacterized protein.	0.999
G4YF32_PHYSP	G5A598_PHYSP	G4YF32	G5A598	Uncharacterized protein.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.999
G4YF32_PHYSP	G5A7X5_PHYSP	G4YF32	G5A7X5	Uncharacterized protein.	Uncharacterized protein.	0.999