34 items (Phytophthora sojae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YFD7_PHYSP	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (250 aa)
	G4YFM1_PHYSP	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	G4YGB0_PHYSP	WD_REPEATS_REGION domain-containing protein. (917 aa)
	G4YHT5_PHYSP	Bms1-type G domain-containing protein. (1208 aa)
	G4YIZ6_PHYSP	WD_REPEATS_REGION domain-containing protein. (476 aa)
	G4YLL5_PHYSP	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (396 aa)
	G4YM22_PHYSP	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1074 aa)
	G4YQD2_PHYSP	WD_REPEATS_REGION domain-containing protein. (552 aa)
	G4YQY1_PHYSP	WD_REPEATS_REGION domain-containing protein. (464 aa)
	G4YU74_PHYSP	Brix domain-containing protein. (287 aa)
	G4YVW9_PHYSP	Nop domain-containing protein. (517 aa)
	G4YWS7_PHYSP	Uncharacterized protein. (370 aa)
	G4YXE2_PHYSP	NUC153 domain-containing protein. (728 aa)
	G4YXP7_PHYSP	Uncharacterized protein. (673 aa)
	G4YY22_PHYSP	Uncharacterized protein. (248 aa)
	G4YYY4_PHYSP	PINc domain-containing protein. (228 aa)
	G4Z6Q4_PHYSP	Uncharacterized protein. (1892 aa)
	G4Z758_PHYSP	Uncharacterized protein. (1134 aa)
	G4ZHB1_PHYSP	Uncharacterized protein. (2351 aa)
	G4ZKK7_PHYSP	Uncharacterized protein. (215 aa)
	G4ZMP5_PHYSP	WD_REPEATS_REGION domain-containing protein. (664 aa)
	G4ZQB2_PHYSP	Uncharacterized protein. (906 aa)
	G4ZQF9_PHYSP	BP28CT domain-containing protein. (2091 aa)
	G4ZSB0_PHYSP	WD_REPEATS_REGION domain-containing protein. (863 aa)
	G4ZUC2_PHYSP	Nop domain-containing protein. (489 aa)
	G4ZUD3_PHYSP	Sas10 domain-containing protein. (511 aa)
	G5A0L8_PHYSP	Uncharacterized protein. (1452 aa)
	G5A3Z7_PHYSP	Uncharacterized protein. (707 aa)
	G5A4V0_PHYSP	S4 RNA-binding domain-containing protein. (181 aa)
	G5A5C1_PHYSP	WD_REPEATS_REGION domain-containing protein. (978 aa)
	G5A712_PHYSP	RRP7 domain-containing protein. (256 aa)
	G5AB60_PHYSP	Uncharacterized protein. (310 aa)
	G5AEV5_PHYSP	WD_REPEATS_REGION domain-containing protein. (514 aa)
	G5AFK1_PHYSP	Uncharacterized protein. (437 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YFD7_PHYSP	G4YFM1_PHYSP	G4YFD7	G4YFM1	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.973
G4YFD7_PHYSP	G4YGB0_PHYSP	G4YFD7	G4YGB0	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	WD_REPEATS_REGION domain-containing protein.	0.982
G4YFD7_PHYSP	G4YHT5_PHYSP	G4YFD7	G4YHT5	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Bms1-type G domain-containing protein.	0.992
G4YFD7_PHYSP	G4YIZ6_PHYSP	G4YFD7	G4YIZ6	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	WD_REPEATS_REGION domain-containing protein.	0.975
G4YFD7_PHYSP	G4YLL5_PHYSP	G4YFD7	G4YLL5	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
G4YFD7_PHYSP	G4YM22_PHYSP	G4YFD7	G4YM22	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.963
G4YFD7_PHYSP	G4YQD2_PHYSP	G4YFD7	G4YQD2	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	WD_REPEATS_REGION domain-containing protein.	0.999
G4YFD7_PHYSP	G4YQY1_PHYSP	G4YFD7	G4YQY1	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	WD_REPEATS_REGION domain-containing protein.	0.996
G4YFD7_PHYSP	G4YU74_PHYSP	G4YFD7	G4YU74	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Brix domain-containing protein.	0.993
G4YFD7_PHYSP	G4YVW9_PHYSP	G4YFD7	G4YVW9	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Nop domain-containing protein.	0.976
G4YFD7_PHYSP	G4YWS7_PHYSP	G4YFD7	G4YWS7	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.972
G4YFD7_PHYSP	G4YXE2_PHYSP	G4YFD7	G4YXE2	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	NUC153 domain-containing protein.	0.992
G4YFD7_PHYSP	G4YXP7_PHYSP	G4YFD7	G4YXP7	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.988
G4YFD7_PHYSP	G4YY22_PHYSP	G4YFD7	G4YY22	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.982
G4YFD7_PHYSP	G4YYY4_PHYSP	G4YFD7	G4YYY4	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	PINc domain-containing protein.	0.999
G4YFD7_PHYSP	G4Z6Q4_PHYSP	G4YFD7	G4Z6Q4	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.992
G4YFD7_PHYSP	G4Z758_PHYSP	G4YFD7	G4Z758	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.982
G4YFD7_PHYSP	G4ZHB1_PHYSP	G4YFD7	G4ZHB1	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.998
G4YFD7_PHYSP	G4ZKK7_PHYSP	G4YFD7	G4ZKK7	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	Uncharacterized protein.	0.997
G4YFD7_PHYSP	G4ZMP5_PHYSP	G4YFD7	G4ZMP5	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	WD_REPEATS_REGION domain-containing protein.	0.992