(16 nodes) Mixed, incl. 90S preribosome, and NUC153 domain network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YGB0_PHYSP	WD_REPEATS_REGION domain-containing protein. (917 aa)
	G4YHT5_PHYSP	Bms1-type G domain-containing protein. (1208 aa)
	G4YM22_PHYSP	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1074 aa)
	G4YQY1_PHYSP	WD_REPEATS_REGION domain-containing protein. (464 aa)
	G4YXE2_PHYSP	NUC153 domain-containing protein. (728 aa)
	G4YXP7_PHYSP	Uncharacterized protein. (673 aa)
	G4Z6Q4_PHYSP	Uncharacterized protein. (1892 aa)
	G4Z758_PHYSP	Uncharacterized protein. (1134 aa)
	G4ZMP5_PHYSP	WD_REPEATS_REGION domain-containing protein. (664 aa)
	G4ZQF9_PHYSP	BP28CT domain-containing protein. (2091 aa)
	G4ZSB0_PHYSP	WD_REPEATS_REGION domain-containing protein. (863 aa)
	G5A0L8_PHYSP	Uncharacterized protein. (1452 aa)
	G5A3Z7_PHYSP	Uncharacterized protein. (707 aa)
	G5A5C1_PHYSP	WD_REPEATS_REGION domain-containing protein. (978 aa)
	G5A712_PHYSP	RRP7 domain-containing protein. (256 aa)
	G5AFK1_PHYSP	Uncharacterized protein. (437 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YGB0_PHYSP	G4YHT5_PHYSP	G4YGB0	G4YHT5	WD_REPEATS_REGION domain-containing protein.	Bms1-type G domain-containing protein.	0.998
G4YGB0_PHYSP	G4YM22_PHYSP	G4YGB0	G4YM22	WD_REPEATS_REGION domain-containing protein.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.997
G4YGB0_PHYSP	G4YQY1_PHYSP	G4YGB0	G4YQY1	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
G4YGB0_PHYSP	G4YXE2_PHYSP	G4YGB0	G4YXE2	WD_REPEATS_REGION domain-containing protein.	NUC153 domain-containing protein.	0.985
G4YGB0_PHYSP	G4YXP7_PHYSP	G4YGB0	G4YXP7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
G4YGB0_PHYSP	G4Z6Q4_PHYSP	G4YGB0	G4Z6Q4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.985
G4YGB0_PHYSP	G4Z758_PHYSP	G4YGB0	G4Z758	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
G4YGB0_PHYSP	G4ZMP5_PHYSP	G4YGB0	G4ZMP5	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.997
G4YGB0_PHYSP	G4ZQF9_PHYSP	G4YGB0	G4ZQF9	WD_REPEATS_REGION domain-containing protein.	BP28CT domain-containing protein.	0.999
G4YGB0_PHYSP	G4ZSB0_PHYSP	G4YGB0	G4ZSB0	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
G4YGB0_PHYSP	G5A0L8_PHYSP	G4YGB0	G5A0L8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
G4YGB0_PHYSP	G5A3Z7_PHYSP	G4YGB0	G5A3Z7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
G4YGB0_PHYSP	G5A5C1_PHYSP	G4YGB0	G5A5C1	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
G4YGB0_PHYSP	G5A712_PHYSP	G4YGB0	G5A712	WD_REPEATS_REGION domain-containing protein.	RRP7 domain-containing protein.	0.996
G4YGB0_PHYSP	G5AFK1_PHYSP	G4YGB0	G5AFK1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.992
G4YHT5_PHYSP	G4YGB0_PHYSP	G4YHT5	G4YGB0	Bms1-type G domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
G4YHT5_PHYSP	G4YM22_PHYSP	G4YHT5	G4YM22	Bms1-type G domain-containing protein.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.999
G4YHT5_PHYSP	G4YQY1_PHYSP	G4YHT5	G4YQY1	Bms1-type G domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
G4YHT5_PHYSP	G4YXE2_PHYSP	G4YHT5	G4YXE2	Bms1-type G domain-containing protein.	NUC153 domain-containing protein.	0.999
G4YHT5_PHYSP	G4YXP7_PHYSP	G4YHT5	G4YXP7	Bms1-type G domain-containing protein.	Uncharacterized protein.	0.998