(10 nodes) Mixed, incl. Pirin, and Homeobox KN domain network (Phytophthora sojae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G4YJZ9_PHYSP	Uncharacterized protein. (529 aa)
	G4YLV3_PHYSP	Homeobox domain-containing protein. (174 aa)
	G4YSS2_PHYSP	PPM-type phosphatase domain-containing protein. (193 aa)
	G4YYC1_PHYSP	Uncharacterized protein. (326 aa)
	G4Z511_PHYSP	Pirin-like protein. (130 aa)
	G4Z515_PHYSP	Pirin-like protein; Belongs to the pirin family. (298 aa)
	G4Z516_PHYSP	Pirin-like protein; Belongs to the pirin family. (294 aa)
	G4ZGM2_PHYSP	PX domain-containing protein. (731 aa)
	G4ZGS9_PHYSP	Uncharacterized protein. (320 aa)
	G4ZSD1_PHYSP	Uncharacterized protein. (223 aa)

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YJZ9_PHYSP	G4ZGM2_PHYSP	G4YJZ9	G4ZGM2	Uncharacterized protein.	PX domain-containing protein.	0.476
G4YLV3_PHYSP	G4YSS2_PHYSP	G4YLV3	G4YSS2	Homeobox domain-containing protein.	PPM-type phosphatase domain-containing protein.	0.550
G4YLV3_PHYSP	G4Z511_PHYSP	G4YLV3	G4Z511	Homeobox domain-containing protein.	Pirin-like protein.	0.550
G4YLV3_PHYSP	G4Z515_PHYSP	G4YLV3	G4Z515	Homeobox domain-containing protein.	Pirin-like protein; Belongs to the pirin family.	0.550
G4YLV3_PHYSP	G4Z516_PHYSP	G4YLV3	G4Z516	Homeobox domain-containing protein.	Pirin-like protein; Belongs to the pirin family.	0.513
G4YLV3_PHYSP	G4ZGM2_PHYSP	G4YLV3	G4ZGM2	Homeobox domain-containing protein.	PX domain-containing protein.	0.550
G4YSS2_PHYSP	G4YLV3_PHYSP	G4YSS2	G4YLV3	PPM-type phosphatase domain-containing protein.	Homeobox domain-containing protein.	0.550
G4YSS2_PHYSP	G4YYC1_PHYSP	G4YSS2	G4YYC1	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.457
G4YSS2_PHYSP	G4Z511_PHYSP	G4YSS2	G4Z511	PPM-type phosphatase domain-containing protein.	Pirin-like protein.	0.550
G4YSS2_PHYSP	G4Z515_PHYSP	G4YSS2	G4Z515	PPM-type phosphatase domain-containing protein.	Pirin-like protein; Belongs to the pirin family.	0.550
G4YSS2_PHYSP	G4Z516_PHYSP	G4YSS2	G4Z516	PPM-type phosphatase domain-containing protein.	Pirin-like protein; Belongs to the pirin family.	0.513
G4YSS2_PHYSP	G4ZGM2_PHYSP	G4YSS2	G4ZGM2	PPM-type phosphatase domain-containing protein.	PX domain-containing protein.	0.550
G4YSS2_PHYSP	G4ZGS9_PHYSP	G4YSS2	G4ZGS9	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.457
G4YSS2_PHYSP	G4ZSD1_PHYSP	G4YSS2	G4ZSD1	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.457
G4YYC1_PHYSP	G4YSS2_PHYSP	G4YYC1	G4YSS2	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.457
G4YYC1_PHYSP	G4ZGM2_PHYSP	G4YYC1	G4ZGM2	Uncharacterized protein.	PX domain-containing protein.	0.457
G4Z511_PHYSP	G4YLV3_PHYSP	G4Z511	G4YLV3	Pirin-like protein.	Homeobox domain-containing protein.	0.550
G4Z511_PHYSP	G4YSS2_PHYSP	G4Z511	G4YSS2	Pirin-like protein.	PPM-type phosphatase domain-containing protein.	0.550
G4Z511_PHYSP	G4ZGM2_PHYSP	G4Z511	G4ZGM2	Pirin-like protein.	PX domain-containing protein.	0.550
G4Z515_PHYSP	G4YLV3_PHYSP	G4Z515	G4YLV3	Pirin-like protein; Belongs to the pirin family.	Homeobox domain-containing protein.	0.550